Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1328
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine synt... 144 3e-34
DQ083239-1|AAY85355.1| 395|Homo sapiens methionine adenosyltran... 144 3e-34
BC001854-1|AAH01854.1| 395|Homo sapiens methionine adenosyltran... 144 3e-34
BC001686-1|AAH01686.1| 395|Homo sapiens methionine adenosyltran... 144 3e-34
AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein. 144 3e-34
X69078-1|CAA48822.1| 395|Homo sapiens methionine adenosyltransf... 140 5e-33
D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine synt... 140 5e-33
BC018359-1|AAH18359.1| 395|Homo sapiens methionine adenosyltran... 140 5e-33
AL359195-2|CAI13695.1| 395|Homo sapiens methionine adenosyltran... 140 5e-33
AL359195-3|CAI13696.1| 145|Homo sapiens methionine adenosyltran... 84 6e-16
AM183997-1|CAJ75485.1| 243|Homo sapiens immunoglobulin heavy ch... 31 4.3
BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, mem... 30 7.5
AK022147-1|BAB13971.1| 674|Homo sapiens protein ( Homo sapiens ... 30 9.9
>X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 144 bits (349), Expect = 3e-34
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +
Sbjct: 65 ILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E++GAGDQGLMFGYATD
Sbjct: 125 RNEEDIGAGDQGLMFGYATD 144
Score = 102 bits (245), Expect = 1e-21
Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 233
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 234 TITKTGM 254
T+ KTGM
Sbjct: 58 TVAKTGM 64
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT+VLAHKLN K+AELRRNG W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Score = 41.9 bits (94), Expect = 0.002
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P RVHT+V+S+QH E++ L+ +RD ++EK
Sbjct: 196 LPIRVHTIVISVQHDEEVCLDEMRDALKEK 225
>DQ083239-1|AAY85355.1| 395|Homo sapiens methionine
adenosyltransferase II protein.
Length = 395
Score = 144 bits (349), Expect = 3e-34
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +
Sbjct: 65 ILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E++GAGDQGLMFGYATD
Sbjct: 125 RNEEDIGAGDQGLMFGYATD 144
Score = 102 bits (245), Expect = 1e-21
Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 233
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 234 TITKTGM 254
T+ KTGM
Sbjct: 58 TVAKTGM 64
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT+VLAHKLN K+AELRRNG W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Score = 41.9 bits (94), Expect = 0.002
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P RVHT+V+S+QH E++ L+ +RD ++EK
Sbjct: 196 LPIRVHTIVISVQHDEEVCLDEMRDALKEK 225
>BC001854-1|AAH01854.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 144 bits (349), Expect = 3e-34
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +
Sbjct: 65 ILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E++GAGDQGLMFGYATD
Sbjct: 125 RNEEDIGAGDQGLMFGYATD 144
Score = 102 bits (245), Expect = 1e-21
Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 233
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 234 TITKTGM 254
T+ KTGM
Sbjct: 58 TVAKTGM 64
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT+VLAHKLN K+AELRRNG W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Score = 41.9 bits (94), Expect = 0.002
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P RVHT+V+S+QH E++ L+ +RD ++EK
Sbjct: 196 LPIRVHTIVISVQHDEEVCLDEMRDALKEK 225
>BC001686-1|AAH01686.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 144 bits (349), Expect = 3e-34
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +
Sbjct: 65 ILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E++GAGDQGLMFGYATD
Sbjct: 125 RNEEDIGAGDQGLMFGYATD 144
Score = 102 bits (245), Expect = 1e-21
Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 233
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 234 TITKTGM 254
T+ KTGM
Sbjct: 58 TVAKTGM 64
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT+VLAHKLN K+AELRRNG W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Score = 41.9 bits (94), Expect = 0.002
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P RVHT+V+S+QH E++ L+ +RD ++EK
Sbjct: 196 LPIRVHTIVISVQHDEEVCLDEMRDALKEK 225
>AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein.
Length = 395
Score = 144 bits (349), Expect = 3e-34
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +
Sbjct: 65 ILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E++GAGDQGLMFGYATD
Sbjct: 125 RNEEDIGAGDQGLMFGYATD 144
Score = 102 bits (245), Expect = 1e-21
Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 233
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 234 TITKTGM 254
T+ KTGM
Sbjct: 58 TVAKTGM 64
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT+VLAHKLN K+AELRRNG W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Score = 41.9 bits (94), Expect = 0.002
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P RVHT+V+S+QH E++ L+ +RD ++EK
Sbjct: 196 LPIRVHTIVISVQHDEEVCLDEMRDALKEK 225
>X69078-1|CAA48822.1| 395|Homo sapiens methionine
adenosyltransferase protein.
Length = 395
Score = 140 bits (339), Expect = 5e-33
Identities = 62/80 (77%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
VLLCGEITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +
Sbjct: 65 VLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E+VGAGDQGLMFGYATD
Sbjct: 125 RNEEDVGAGDQGLMFGYATD 144
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 90 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGM 254
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGM
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGM 64
Score = 63.3 bits (147), Expect = 9e-10
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGA 194
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P R+HT+V+S+QH+E ITLE +R ++E+
Sbjct: 196 IPVRIHTIVISVQHNEDITLEEMRRALKEQ 225
>D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 140 bits (339), Expect = 5e-33
Identities = 62/80 (77%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
VLLCGEITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +
Sbjct: 65 VLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E+VGAGDQGLMFGYATD
Sbjct: 125 RNEEDVGAGDQGLMFGYATD 144
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 90 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGM 254
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGM
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGM 64
Score = 63.3 bits (147), Expect = 9e-10
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGA 194
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P R+HT+V+S+QH+E ITLE +R ++E+
Sbjct: 196 IPVRIHTIVISVQHNEDITLEEMRRALKEQ 225
>BC018359-1|AAH18359.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 140 bits (339), Expect = 5e-33
Identities = 62/80 (77%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
VLLCGEITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +
Sbjct: 65 VLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E+VGAGDQGLMFGYATD
Sbjct: 125 RNEEDVGAGDQGLMFGYATD 144
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 90 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGM 254
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGM
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGM 64
Score = 63.3 bits (147), Expect = 9e-10
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGA 194
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P R+HT+V+S+QH+E ITLE +R ++E+
Sbjct: 196 IPVRIHTIVISVQHNEDITLEEMRRALKEQ 225
>AL359195-2|CAI13695.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 140 bits (339), Expect = 5e-33
Identities = 62/80 (77%), Positives = 75/80 (93%)
Frame = +2
Query: 254 VLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN 433
VLLCGEITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +
Sbjct: 65 VLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLD 124
Query: 434 RNDEEVGAGDQGLMFGYATD 493
RN+E+VGAGDQGLMFGYATD
Sbjct: 125 RNEEDVGAGDQGLMFGYATD 144
Score = 96.7 bits (230), Expect = 8e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 90 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGM 254
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGM
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGM 64
Score = 63.3 bits (147), Expect = 9e-10
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+ GA
Sbjct: 150 MPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGA 194
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +3
Query: 645 VPQRVHTVVVSLQHSEKITLETLRDEIREK 734
+P R+HT+V+S+QH+E ITLE +R ++E+
Sbjct: 196 IPVRIHTIVISVQHNEDITLEEMRRALKEQ 225
>AL359195-3|CAI13696.1| 145|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 145
Score = 83.8 bits (198), Expect = 6e-16
Identities = 38/59 (64%), Positives = 50/59 (84%), Gaps = 3/59 (5%)
Frame = +2
Query: 326 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATD 493
H+ D ++K GFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQGLMFGYATD
Sbjct: 23 HLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATD 81
Score = 72.5 bits (170), Expect = 1e-12
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 129 ESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKT 248
ESVGEGHPDK+CDQISDA+LDAHL QDP+AKVAC KT
Sbjct: 1 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACGFDFKT 40
Score = 63.3 bits (147), Expect = 9e-10
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = +1
Query: 508 LPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGA 642
+PLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+ GA
Sbjct: 87 MPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGA 131
>AM183997-1|CAJ75485.1| 243|Homo sapiens immunoglobulin heavy chain
protein.
Length = 243
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 554 QSSGEMENFGGQDQIQKHRLLANMYL-LVVHSPTESS--YCSRVTATL*KDYPRDLA 715
+S+G + F G+ + ++ ++ YL L +P +++ YC+R KDYPR LA
Sbjct: 51 ESAGSAQKFQGRVTMTRNTSISTAYLELTSLTPEDTAVYYCARRGNEFWKDYPRGLA 107
>BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, member
15 protein.
Length = 691
Score = 30.3 bits (65), Expect = 7.5
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 18 WANSKFRMPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAH 197
W K + P T+ M G++K + +D GS S + P +M D +SDAI
Sbjct: 235 WKKIK-KDPYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLK 288
Query: 198 LNQDPD 215
+NQ +
Sbjct: 289 INQQEE 294
>AK022147-1|BAB13971.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ12085 fis, clone HEMBB1002510, weakly similar to
GYP7 PROTEIN. ).
Length = 674
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 42 PETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPD 215
P T+ M G++K + +D GS S + P +M D +SDAI +NQ +
Sbjct: 225 PYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLKINQQEE 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,796,183
Number of Sequences: 237096
Number of extensions: 2768557
Number of successful extensions: 5729
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5729
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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