Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1324
         (756 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    72   1e-11
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    48   3e-04
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.066
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.27 
UniRef50_P22814 Cluster: Segmentation protein Runt; n=25; Dipter...    37   0.47 
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.3  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.8  
UniRef50_Q4P0I5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 39/64 (60%), Positives = 42/64 (65%)
 Frame = +2

Query: 518 TTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPR 697
           TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR
Sbjct: 40  TTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPR 99

Query: 698 AGSG 709
            GSG
Sbjct: 100 VGSG 103


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +2

Query: 149 GKCFR*CSSCDDPRISPLTSQYECPQLSLL---IITSESENQQNRTEIIFYYS 298
           GKCFR C S ++ RISPLTS+Y+CPQ + +   +I       Q  TE+ F+ S
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQATPINWPVIKRTPSRIQTMTEVTFFPS 311


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.066
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 652 PRKSPVSLFFVTTSPCREW 708
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -2

Query: 140 FHQSRTKVRGSKAIRYRPSSN 78
           F   RTKVRGSK IRYRPSSN
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_P22814 Cluster: Segmentation protein Runt; n=25;
           Diptera|Rep: Segmentation protein Runt - Drosophila
           melanogaster (Fruit fly)
          Length = 510

 Score = 37.1 bits (82), Expect = 0.47
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +3

Query: 42  SNVGGSLDDIGTVRTRAVSNRLRTSNFRS*LMKTPLANAFADVRLATIQEFHL*RRNTNA 221
           S+ G S  D+ T  T + SN   TS   S  M + + + FA +    +QE+H     T +
Sbjct: 66  SSTGSSTPDLSTNNTSSSSNAT-TSPQNSAKMPSSMTDMFASLH-EMLQEYHGELAQTGS 123

Query: 222 PSYPY*SLPRSLKTNKIEPRSYSII 296
           PS    +LP   ++NK  P ++ +I
Sbjct: 124 PSILCSALPNHWRSNKSLPGAFKVI 148


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 562 SWNYRGCWHQTCP 600
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -2

Query: 140 FHQSRTKVRGSKAIRYRPSSN 78
           FH  RTKV GSK IRY PS N
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLN 26


>UniRef50_Q4P0I5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 689

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +2

Query: 398 RDRILILNRRFLERRLTDDMLRKRVSITADACTDSAATNATTSFLTAT 541
           RD ++++NR+    RL +  LRK +  T  A   + A ++TT+   AT
Sbjct: 392 RDPLILVNRKLANARLVEASLRKLIQNTDRAAASAYAASSTTNGTAAT 439


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,652,729
Number of Sequences: 1657284
Number of extensions: 14374902
Number of successful extensions: 34166
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34162
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)