Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1323
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.5  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -1

Query: 408 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 289
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 109 PWRSPESAQLKPHTGNH 159
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 619 LRAPPEELSPPRALPAPVPQSRASVF*G 536
           ++A PE++S  R  P P        F G
Sbjct: 513 IKADPEKISAIRNFPVPQKTKHVRAFLG 540


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 382 AEVTKDCMDPEDDDGMIPY 438
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 382 AEVTKDCMDPEDDDGMIPY 438
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 375 TVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 265
           T  K L   K+ V  L      +F+L   + TF +IF
Sbjct: 80  TKAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDIF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,274
Number of Sequences: 336
Number of extensions: 2388
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)