Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1323
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 57 1e-08
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 48 5e-06
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 48 5e-06
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 48 8e-06
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 48 8e-06
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 47 1e-05
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 46 3e-05
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 45 6e-05
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 44 8e-05
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 40 0.002
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 40 0.002
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 38 0.007
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 36 0.027
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 34 0.11
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 33 0.25
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 32 0.44
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 32 0.44
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 31 0.77
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5221| Best HMM Match : PHD (HMM E-Value=6.8) 30 1.3
SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0) 29 2.4
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25) 28 7.2
SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7) 28 7.2
SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 28 7.2
SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35) 28 7.2
SB_51947| Best HMM Match : 7tm_1 (HMM E-Value=1.4013e-45) 27 9.5
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 27 9.5
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +1
Query: 271 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 450
F+EC K++D+N NGL+ AEL H L +LG+KL D EV + + ED+ G + Y F+
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNL---MVGFEDNQGQVFYEDFV 63
Query: 451 KKVM 462
+ VM
Sbjct: 64 RAVM 67
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +1
Query: 235 SKERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 414
+++ + + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 415 DDDGMIPY 438
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 59 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
AFS++D +G G I LG ++R+L NPT A +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 271 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 450
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +1
Query: 235 SKERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 414
+++ + + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 415 DDDGMIPY 438
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 59 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
AFS++D +G G I LG ++R+L NPT A +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 271 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 450
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 438
E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG + Y
Sbjct: 84 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 139
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 17 MSD-LSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 268 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 447
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 448 L 450
L
Sbjct: 70 L 70
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/66 (34%), Positives = 41/66 (62%)
Frame = +1
Query: 241 ERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 420
++++ G+ ++F+E L+++D++ G +L AEL L++LGEKL D EV + +D
Sbjct: 581 QKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPV---DDS 637
Query: 421 DGMIPY 438
G I Y
Sbjct: 638 SGHINY 643
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXXFLPIYSQ 235
AFS++D G GKI+ +G LLR+L NPT A + FLPIY+
Sbjct: 519 AFSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTS 578
Query: 236 AKKDK 250
A + K
Sbjct: 579 AYQKK 583
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 444
EDF++ L+++D + +G++ EL H L LGEKL DSEV + + ED G I
Sbjct: 86 EDFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLIQGL---EDKQGQIDCEE 142
Query: 445 FLKKVM 462
F+ V+
Sbjct: 143 FILSVL 148
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 23 DLSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
+L+ D+ +F +YD +G KID+ LG++LR L NPT A +
Sbjct: 4 NLTDKDIRQLRESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEV 49
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 277 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 450
E +LYDK + + ++L L LG+ ++EV ++ + MDPE + I + FL
Sbjct: 15 ESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSE-MDPEGGN-RISFEEFL 70
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 438
E+ E +++DK+ NG + AEL H + LGEKL D EV E+ + D DG + Y
Sbjct: 48 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEA--DIDGDGQVNY 103
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 217 PSHLQP-SKERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 393
P LQ +K+ + E+ + K++DKN +G++ +EL + LGE+L D EV E+
Sbjct: 346 PEFLQMVAKKIKETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMI 405
Query: 394 KDCMDPEDDDGMIPY 438
++ D DGMI Y
Sbjct: 406 REA--DIDGDGMIDY 418
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/102 (22%), Positives = 51/102 (50%)
Frame = +1
Query: 154 NHRETRWYKEEGREAAHTRRVPSHLQPSKERQRPGAYEDFLECLKLYDKNENGLMLGAEL 333
N+++ R ++ GR+ ++ + +E+ + E L+DK+ G + +EL
Sbjct: 254 NNQKYRNFRLNGRKPLSKNQL-LEISSVREKLSEEQVAELKEAFALFDKDGGGSISSSEL 312
Query: 334 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKV 459
H + +LG+ + E+ ++ + +DD+G I + FL+ V
Sbjct: 313 AHVMRSLGQNPTEQELKDMIAEV--DQDDNGEIDFPEFLQMV 352
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +1
Query: 238 KERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 417
K+ Q A + E +++D+N +G + EL + +LGEKL D E+ E+ ++ D
Sbjct: 64 KQMQHRDAEAEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREA--DLD 121
Query: 418 DDGMIPYAAFLKKV 459
DG+I + F++ V
Sbjct: 122 GDGVINFQEFVQMV 135
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDC-MDPEDDDGMIPYAAFLKKVMA 465
L+DK+ +G + EL + +LG+ D E+ ++ ++ D + + A +KK M
Sbjct: 8 LFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEFLAMMKKQMQ 67
Query: 466 *KTSQLVISLVIRSFLR 516
+ ++ + R F R
Sbjct: 68 HRDAEAEMREAFRVFDR 84
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 50 ASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 148
AS FS++D +G G I L ++++L NP+
Sbjct: 2 ASGGFSLFDKDGSGTISNEELEVVMKSLGQNPS 34
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 226 LQPSKERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 405
L S ++ G E+F+E L+ +D N +G M A+L + L +LG+ L + + +
Sbjct: 68 LYVSYSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAI----V 123
Query: 406 DPEDDDGMIPYAAFLKKVMA 465
+D+ G I Y + KVMA
Sbjct: 124 ALQDNHGTIEYEKLVDKVMA 143
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 17 MSDLSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
M DL+ + AFS++D GKG IDA + D+LRA+ NP + I
Sbjct: 1 MVDLNDEQIGELKDAFSLFDKTGKGYIDADIVIDVLRAVGLNPQIDDI 48
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 444
E ++C K +D++++G + + L H L +LGE+L D E ++ ++ G I Y
Sbjct: 356 ESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEEFDALSSGYVNAR---GEIDYEN 412
Query: 445 FLKKVM 462
+K+V+
Sbjct: 413 MVKEVL 418
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 23 DLSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
++ + D ++ F +YD G KID LG +LRA NPT + +
Sbjct: 273 NMIERDEQLLKDIFDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEV 318
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 444
E ++C K +D++++G + + L H L +LGE+L D E ++ ++ G I Y
Sbjct: 88 ESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEEFDALSSGYVNAR---GEIDYEN 144
Query: 445 FLKKVM 462
+K+V+
Sbjct: 145 MVKEVL 150
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 23 DLSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 160
++ + D ++ F +YD G KID LG +LRA NPT + +
Sbjct: 5 NMIERDEQLLKDIFDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEV 50
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 444
E+ L+ KL+D +E G + L LGE L D E+ E+ + D DG I A
Sbjct: 59 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA--DRDGDGEINEAE 116
Query: 445 FLK 453
FL+
Sbjct: 117 FLR 119
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +1
Query: 178 KEEGREAAHTRRVPSHLQPSKERQRPGAYE-DFLECLKLYDKNENGLMLGAELTHTLLAL 354
K+ ++ + +P ++ + + E D E L+DK+ NGL+ E+ +
Sbjct: 58 KQADKDGSGDIDLPEFIELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCM 117
Query: 355 GEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 465
G + + E E+ K D DG I Y F M+
Sbjct: 118 GFNITEKEAVELVKQA--DMDGDGHINYEEFKNAFMS 152
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1
Query: 178 KEEGREAAHTRRVPSHLQPSKERQRPGAYE-DFLECLKLYDKNENGLMLGAELTHTLLAL 354
K+ ++ + +P ++ + + E D E L+DK+ NGL+ E+ L +
Sbjct: 187 KQADKDGSGDIDLPEFIELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCM 246
Query: 355 GEKLDDSEVAEVTKDCMDPEDDDGMIPY 438
G + + E E+ K D DG I Y
Sbjct: 247 GFNITEKEAVELVKQA--DIDGDGHINY 272
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 17 MSDLSKNDVEMASF--AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 148
M+ SKND + AFS++D +G G I A + +L + N T
Sbjct: 206 MASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNIT 251
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 244 RQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 423
+++P A EDFLE LK++D+ NG + L G+K+ + E + D
Sbjct: 74 KKKPPAKEDFLEGLKVFDREANGKIDSGTFRGLLCNRGDKITEEEADAILAGHEDTV--K 131
Query: 424 GMIPYAAFLKKVMA 465
G + Y + VMA
Sbjct: 132 GEVDYNELIDFVMA 145
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +2
Query: 26 LSKNDVEMASF--AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXX 199
+S + ++ F F ++D G G I+ +G +LRA+ NP +
Sbjct: 1 MSYKEEQLTEFRDGFMLFDQIGDGNINYDQIGKMLRAMGLNPIDGEV-KKVEADFKTKER 59
Query: 200 XXXXXFLPIYSQAKKDK 250
+LPIY++ K K
Sbjct: 60 VSFEEWLPIYTEFSKKK 76
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 34.3 bits (75), Expect = 0.083
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 244 RQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 423
R +P + + ++ D+++ G + ELT + GE EV E+ +DPE
Sbjct: 55 RYKPAPEDQLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDPE--K 112
Query: 424 GMIPYAAFL 450
G+I Y F+
Sbjct: 113 GVIFYKDFV 121
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 26 LSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 148
LSK + AF+++D + G I + LG ++RAL NPT
Sbjct: 4 LSKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPT 44
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 265 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 444
E+ + +++D+N +G + EL + LG+ L E E+ M +D DG + Y
Sbjct: 217 ENLRQAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIG--MLDQDGDGKLGYEE 274
Query: 445 FL 450
F+
Sbjct: 275 FV 276
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KHHTK*ATSARTTLKWRLSPSQSTTLKAKV-RSMPSTLAIS*ERSTQTPHWQPSRNSVVQ 179
K T TS +T+ K L+ S+ T+ K + RS+ ++ S + S +T + SRN+ +
Sbjct: 93 KQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDR-KKSRNTSPK 151
Query: 180 RRRARSCSHSKSSFPSTAKQRKTKT 254
R S S + P T+ + +KT
Sbjct: 152 RSPKTSSKSSPKTSPKTSLKTSSKT 176
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 32.3 bits (70), Expect = 0.33
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +3
Query: 30 ARTTLKWRL-SPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSH 206
+RT+L R S + + + K RS + + S +++ R RRR+RS SH
Sbjct: 640 SRTSLSSRSRSRDRGGSRRGKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRSRRRSRSSSH 699
Query: 207 SKSSFPSTAKQRKTKTGSV*RFPGMSEAV*QERKRSHAW 323
S SS + + +++ R S + +R+RS +W
Sbjct: 700 SSSSLSRSRSRSRSRGRGRRRSRSRSSSRKGKRQRSRSW 738
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 59 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 148
AF +D +G G I LG ++R+L NPT
Sbjct: 5 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 34
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 59 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 148
AF +D +G G I LG ++R+L NPT
Sbjct: 53 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 82
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 277 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 453
+ ++DK+ +G + EL + LGE D E+ ++ D +D G I +A F++
Sbjct: 7 DVFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADA--DKDGSGEIRFAQFMQ 63
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 24 TSARTTLKWRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCS 203
TS+ T+ K + SPS+S+ K +S+P ++A S +T + QPS NS +R + S
Sbjct: 345 TSSLTSRKSQ-SPSKSSGSSQKKQSLPPSIATSSVGIKRTKNPQPSLNSSSERLHTKRSS 403
>SB_5221| Best HMM Match : PHD (HMM E-Value=6.8)
Length = 94
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 TRWYKEEGREA-AHTRRVPSHLQPSKERQRPGAYEDFLECLKLYDKNEN 309
TRW ++ AH +P S E+ R +EC+KL DK+EN
Sbjct: 22 TRWREQNSIIVRAHDLEIPIDCGGSHEQYRCACEGYHIECVKLADKDEN 70
>SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1236
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 193 EAAHTRRVPSHLQPSKERQRPGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 372
EAAH R L P K PG ED L + NEN L G +L A +
Sbjct: 383 EAAHRIRDQPELSPKKPNMNPGKSED-----DLLEPNENNLSNG-DLVANGNAPVLPNGN 436
Query: 373 SEVAEVTKDCMDPE--DDDGMIPYAA 444
S ++ ++ C D D D IP A+
Sbjct: 437 SRLSASSRSCKDLSLGDIDSRIPCAS 462
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 29 SKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRALNSNP 145
S+ +E AFS+Y+ +G I + +L+R+L NP
Sbjct: 222 SREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNP 260
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/44 (22%), Positives = 27/44 (61%)
Frame = +2
Query: 2 QTPHKMSDLSKNDVEMASFAFSIYDFEGKGKIDAFNLGDLLRAL 133
+TP + + +++++YDFEG+G++ +L +L++++
Sbjct: 241 ETPECGMSVKSASSDHQEWSYTLYDFEGQGQVTREDLRNLVKSI 284
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 59 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 148
AF +YD +G G + L +R L NPT
Sbjct: 153 AFHMYDADGSGHVTTKELHKAMRTLGFNPT 182
>SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25)
Length = 340
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2
Query: 5 TPHKMSDLSKNDVEMASFAFSIY 73
T +MSD+ ++D++ AS+AFSI+
Sbjct: 91 TTSEMSDIYESDIDPASWAFSIW 113
>SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7)
Length = 760
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 124 ESAQLKPHTGNHRETRWYKEEGREAAHTRRVPSHLQPSKERQRP 255
+ A L + R ++WY A+T V +H++ R+RP
Sbjct: 703 DGAHLIQYKDGVRRSQWYHIRAFVLAYTNSVATHVEADPSRRRP 746
>SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 391 TKDCMDPEDDDGMIPYAAFLKKVMA*KTSQLVISLVIRS 507
+KD +D D PY LK + A SQLV S ++ S
Sbjct: 21 SKDALDAITGDHFNPYCKDLKDISAAPKSQLVASAILLS 59
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 HTK*ATSART-TLKWRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRR 185
HTK ++ T+ + +Q+ ++ +V+ S L + E+ H + + + +V +
Sbjct: 2131 HTKSTKDEKSKTVPEKQVQAQTKRMETEVKPTKSELENNNEKHMNDLHDESAFSKLVFKL 2190
Query: 186 RARSCSHSKSSFPSTAKQRKTK 251
RA S HS+S P+TA+ TK
Sbjct: 2191 RAGS--HSESKPPTTAESTMTK 2210
>SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35)
Length = 848
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 118 SPESAQLKPHTGNHRETRWYKEEGREAAHTRRVPSHLQPSKERQRPGAYEDFL 276
S E ++K +T + GR TR+ + P E+ RP + ED++
Sbjct: 274 SKEEKEVKKGNNTETKTENPGQIGRPTVFTRKTKVNFVPLAEQMRPTSLEDYV 326
>SB_51947| Best HMM Match : 7tm_1 (HMM E-Value=1.4013e-45)
Length = 609
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 215 FLPIYSQAKKDKDRERMKISWNV*SCMTRTKTVSCLALSS 334
++ + Q+K+ K+R R +S SC+T ++ +S +++SS
Sbjct: 181 YVNVRRQSKRVKERSRSTLSMGDISCVTPSRPLSGVSISS 220
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 44 EMASFAFSIYDFEGKGKIDAFNLGDLLRAL 133
E +AFS+YD +G G I + +++RA+
Sbjct: 99 EKLKWAFSMYDLDGNGYISRQEMLEIVRAI 128
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 27.5 bits (58), Expect = 9.5
Identities = 30/106 (28%), Positives = 49/106 (46%)
Frame = +3
Query: 9 HTK*ATSARTTLKWRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRR 188
+TK A + + + + S +++ K+ R S+LA S + TQT + +PS S R
Sbjct: 7 NTKPAAMSMDSFRAKKGTSSTSSPKSS-RPGRSSLASSTDSITQTSNARPSSASKPSNSR 65
Query: 189 ARSCSHSKSSFPSTAKQRKTKTGSV*RFPGMSEAV*QERKRSHAWR 326
RS S + + +QR+ K M E +ERKR + R
Sbjct: 66 TRSA--SVENLDMSLQQRRDKVKQ------MREKQAEERKRKNEER 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,531,412
Number of Sequences: 59808
Number of extensions: 353750
Number of successful extensions: 1280
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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