BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1322
(580 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;... 147 2e-34
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 101 9e-21
UniRef50_A4VF70 Cluster: Putative uncharacterized protein; n=1; ... 100 2e-20
UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n... 63 4e-09
UniRef50_A5K5F4 Cluster: Senescence-associated protein, putative... 62 7e-09
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;... 52 1e-05
UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve... 51 2e-05
UniRef50_A4DID9 Cluster: Putative uncharacterized protein; n=10;... 49 9e-05
UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3; ... 48 1e-04
UniRef50_Q14C49 Cluster: 4933429F08Rik protein; n=3; Euarchontog... 47 4e-04
UniRef50_Q6L6Z3 Cluster: RRNA intron-encoded endonuclease; n=7; ... 44 0.003
UniRef50_Q4YZY1 Cluster: Putative uncharacterized protein; n=4; ... 38 0.13
UniRef50_A7EB28 Cluster: Predicted protein; n=1; Sclerotinia scl... 35 1.6
UniRef50_Q3BKH8 Cluster: Putative uncharacterized protein; n=4; ... 34 2.8
>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
n=4; Eukaryota|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 282
Score = 147 bits (356), Expect = 2e-34
Identities = 73/107 (68%), Positives = 77/107 (71%), Gaps = 3/107 (2%)
Frame = +1
Query: 196 NCGSSRTEQYYYR---NDKPSVGKTNLSHDGLSPAHVPF*WVNNPTLGEFCFAMIGRADI 366
NC + R YY GKTNLSHDGL PAHVP+ WVNNPTLGEFCF MIGRADI
Sbjct: 38 NCANQRFLSYYVELLLRHCHQWGKTNLSHDGLIPAHVPYWWVNNPTLGEFCFTMIGRADI 97
Query: 367 EGSKXNVAMNAWLPQASYPCGNFSGTSC*KLFILKDR*AVLSQSLCV 507
EGSK NVAMNAWLPQASYPCGNFS TS K LKDR A LS+ + V
Sbjct: 98 EGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRSLKDRLATLSRFVFV 144
Score = 38.7 bits (86), Expect = 0.098
Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 96 ARLASA----LEAFRHNPADGSFXXXXXXXXXXTKCPKLRFLSY*AVLL 230
AR+AS+ LEAF HNP GSF T C RFLSY LL
Sbjct: 4 ARIASSPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELL 52
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 101 bits (243), Expect = 9e-21
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +1
Query: 307 WVNNPTLGEFCFAMIGRADIEGSKXNVAMNAWLPQASYPCGNFSGTSC*K 456
WVNNPTLGEFCF MIGRADIEGSK +VAMNAW PQASYPCGNFS TSC K
Sbjct: 25 WVNNPTLGEFCFTMIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 74
>UniRef50_A4VF70 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 116
Score = 100 bits (240), Expect = 2e-20
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = -3
Query: 491 ESTAYRSFSIKSF*QEVPEKLPQG*LACGSQAFIATXLFDPSMSALPIIAKQNSPSVGLF 312
ES AYRSF+ SF EV EKLPQG LACGSQ FI+T LFDPSMSALPII KQNS VGLF
Sbjct: 51 ESVAYRSFNFTSFKLEVSEKLPQGQLACGSQEFISTLLFDPSMSALPIIVKQNSQRVGLF 110
Query: 311 THQKGT 294
T Q+GT
Sbjct: 111 TRQQGT 116
>UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2901 UniRef100 entry -
Xenopus tropicalis
Length = 154
Score = 63.3 bits (147), Expect = 4e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 346 MIGRADIEGSKXNVAMNAWLPQASYPCGN 432
MIGRADIEGSK NVAMNAWLPQASYPCG+
Sbjct: 1 MIGRADIEGSKSNVAMNAWLPQASYPCGS 29
>UniRef50_A5K5F4 Cluster: Senescence-associated protein, putative;
n=1; Plasmodium vivax|Rep: Senescence-associated
protein, putative - Plasmodium vivax
Length = 131
Score = 62.5 bits (145), Expect = 7e-09
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +1
Query: 346 MIGRADIEGSKXNVAMNAWLPQASYPCGNFSGTS 447
MIGRADIEGSK VA +AW PQASYPCGNFS TS
Sbjct: 1 MIGRADIEGSKSYVARSAWQPQASYPCGNFSDTS 34
>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
n=3; Eukaryota|Rep: Putative senescence-associated
protein - Plasmodium yoelii yoelii
Length = 205
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +1
Query: 346 MIGRADIEGSKXNVAMNAWLPQASYPCGN 432
MIGRADIE SK VA NAW PQASYPCG+
Sbjct: 1 MIGRADIERSKSYVAKNAWQPQASYPCGS 29
>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 746
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 231 IVILLSTRGTAVSDIWFMHSAERPVVRSYH 142
+VILLSTRGTA SD W +H AE+P+VRSYH
Sbjct: 660 VVILLSTRGTADSDNWHLHLAEKPMVRSYH 689
>UniRef50_A4DID9 Cluster: Putative uncharacterized protein; n=10;
Firmicutes|Rep: Putative uncharacterized protein -
Listeria monocytogenes FSL N3-165
Length = 112
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/57 (47%), Positives = 29/57 (50%)
Frame = -2
Query: 435 KVTTGITGLWQPSVHSDVXF*SFDVGSSYHCEAKFAKRWIVHPSKGNVSWA*TVVRQ 265
K T GITGL P VH D DVGSS+ K W V P K + SW VVRQ
Sbjct: 45 KATPGITGLSPPRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQ 101
>UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 160
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 391 MNAWLPQASYPCGNFSGTS 447
MNAWLPQASYPCGNFSGTS
Sbjct: 1 MNAWLPQASYPCGNFSGTS 19
>UniRef50_Q14C49 Cluster: 4933429F08Rik protein; n=3;
Euarchontoglires|Rep: 4933429F08Rik protein - Mus
musculus (Mouse)
Length = 29
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +1
Query: 391 MNAWLPQASYPCGNFSGTSC*K 456
MNAW PQASYPCGNFS TSC K
Sbjct: 1 MNAWPPQASYPCGNFSDTSCLK 22
>UniRef50_Q6L6Z3 Cluster: RRNA intron-encoded endonuclease; n=7;
Archaea|Rep: RRNA intron-encoded endonuclease -
Thermoproteus sp. IC-062
Length = 272
Score = 43.6 bits (98), Expect = 0.003
Identities = 28/59 (47%), Positives = 31/59 (52%)
Frame = -2
Query: 438 RKVTTGITGLWQPSVHSDVXF*SFDVGSSYHCEAKFAKRWIVHPSKGNVSWA*TVVRQV 262
RKVT GITG + V D DV SS+ A AK + P KGNV W TV RQV
Sbjct: 204 RKVTPGITGSSRVRVPIDPAVWYPDVVSSHPGGAAAAKGGVARPLKGNVRWVQTVARQV 262
>UniRef50_Q4YZY1 Cluster: Putative uncharacterized protein; n=4;
Eukaryota|Rep: Putative uncharacterized protein -
Plasmodium berghei
Length = 54
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 319 DCSPIKRERELGLDRRET 266
DCSP RERELGLDRRET
Sbjct: 6 DCSPANRERELGLDRRET 23
>UniRef50_A7EB28 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 147
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 310 VNNPTLGEFCFAMIGRADIEGSK 378
VN+P L EFCF + RADIEGS+
Sbjct: 120 VNSPMLTEFCFGIRERADIEGSE 142
>UniRef50_Q3BKH8 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Magnetospirillum gryphiswaldense
Length = 76
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 328 QALDCSPIKRERELGLDRRET 266
Q CSPIK RELGL+RRET
Sbjct: 17 QGFGCSPIKVVRELGLERRET 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,183,549
Number of Sequences: 1657284
Number of extensions: 11421429
Number of successful extensions: 27742
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27736
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -