Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1317
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.2  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   2.7  
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     23   6.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.2  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   8.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.2  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.2  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 138 NSSRTSRRRLQATL 97
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 447 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 352
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 121 SAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFPF 2
           S+ +   F +P  T  F D  T I  +P  G+G G GFPF
Sbjct: 76  SSGAFPQFSIPSWTN-FTDAFTSI--LPFFGNGQGGGFPF 112


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 23/91 (25%), Positives = 33/91 (36%)
 Frame = -1

Query: 492 KTNITHEHRPDPXPARIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSID*RLFTLET 313
           K     + +P P    IR P  P     +  +  P+  +  A  P L +          T
Sbjct: 141 KATAEQQQQPHPQSPAIREPISPGPIHPAVLLPYPQHVLHPAHHPALLHP------AYHT 194

Query: 312 CCGYGYEPARHLHVHPSPEFQGPQRVSGHRR 220
              + Y+P+     HP P    PQR S  RR
Sbjct: 195 GLHHYYQPSPS---HPQPIVPQPQRASLERR 222


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 23/91 (25%), Positives = 33/91 (36%)
 Frame = -1

Query: 492 KTNITHEHRPDPXPARIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSID*RLFTLET 313
           K     + +P P    IR P  P     +  +  P+  +  A  P L +          T
Sbjct: 141 KATAEQQQQPHPQSPAIREPISPGPIHPAVLLPYPQHVLHPAHHPALLHP------AYHT 194

Query: 312 CCGYGYEPARHLHVHPSPEFQGPQRVSGHRR 220
              + Y+P+     HP P    PQR S  RR
Sbjct: 195 GLHHYYQPSPS---HPQPIVPQPQRASLERR 222


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 226 VSGYSLRTLKFR*GMYVEMSRRFVPISAAGLQGEE 330
           + GYS+RT +FR   +++ +  +     + + GEE
Sbjct: 455 IMGYSMRTDRFRYTAWIKFNPDYFKRDWSTIYGEE 489


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGA 208
           ++   H   H +    GP  +S  R  CGA
Sbjct: 655 HQGQHHAQHHSNGTHHGPSLMSSARESCGA 684


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 200 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 81
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 200 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 81
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,902
Number of Sequences: 2352
Number of extensions: 16497
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)