Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1317
(642 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g18890.1 68417.m02785 brassinosteroid signalling positive reg... 30 1.1
At1g76965.1 68414.m08961 glycine-rich protein 30 1.1
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 3.5
At5g42370.1 68418.m05159 expressed protein 29 3.5
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 3.5
At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative... 28 4.6
At3g50750.1 68416.m05554 brassinosteroid signalling positive reg... 28 4.6
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 4.6
At1g08910.1 68414.m00991 zinc finger (MIZ type) family protein s... 28 6.1
At5g60000.1 68418.m07524 hypothetical protein 27 8.0
At5g28250.1 68418.m03425 Ulp1 protease family protein contains P... 27 8.0
At5g22390.1 68418.m02612 expressed protein 27 8.0
At5g07700.1 68418.m00883 myb family transcription factor (MYB76)... 27 8.0
>At4g18890.1 68417.m02785 brassinosteroid signalling positive
regulator-related contains similarity to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 284
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = -2
Query: 449 PASASRPNPTRPGPQSQSL---FRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDI 279
P+S+S P+PT P + SL ++ SN P+ L + S+P P R +
Sbjct: 107 PSSSSFPSPTNPFGDANSLIPWLKNLSSNSPSKLPF-FHGNSISAPVTPPLARSPTRDQV 165
Query: 278 STYIPHLNFKVRREYPDTAANAVLFAFRTISPFY 177
+ IP + + P + ++ F+ + +PF+
Sbjct: 166 T--IPDSGWLSGMQTPQSGPSSPTFSLVSRNPFF 197
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 462 DPXPARIRFPSKPDTPRSSEPILIPKLRIQFAD 364
DP A + FP KP+ P P +P+L + F D
Sbjct: 92 DPGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 246 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 112
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 185 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 75
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 179
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 239
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 591 RVRIQSET*DDFRECHIKYIQFLRPH 514
R+RIQ DF + + K+++FL PH
Sbjct: 172 RIRIQGFVVSDFYDEYSKFLEFLHPH 197
>At3g50750.1 68416.m05554 brassinosteroid signalling positive
regulator-related contains similarity to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 276
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 449 PASASRPNPTRPGP-QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRP 312
P+S+S P+PTR P QS + Y NL +S L S+P P
Sbjct: 114 PSSSSYPSPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTP 160
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 241 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 143
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At1g08910.1 68414.m00991 zinc finger (MIZ type) family protein
similar to putative variable cytadhesin protein
(GI:7677312) {Mycoplasma gallisepticum}; contains Pfam
PF02891: MIZ zinc finger domain
Length = 842
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/93 (21%), Positives = 36/93 (38%)
Frame = -2
Query: 461 TRXRPASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRD 282
TR PAS + P P P Q + + +N TS+ S S + D
Sbjct: 467 TRDSPASQALPMTFSPTPSPQDILATNAANFGTSMPAAQSSQFQGSHVTSLGNCEGRTSD 526
Query: 281 ISTYIPHLNFKVRREYPDTAANAVLFAFRTISP 183
+ H+ +V+ ++P + ++ + SP
Sbjct: 527 LMARWNHIYGRVQTQFPPAPLSHHHYSMQNQSP 559
>At5g60000.1 68418.m07524 hypothetical protein
Length = 149
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -2
Query: 335 RGSSPWRPAADMGTNRRDISTYIPHLNFKVRREYPD-TAANAVLFAFRTISPFYRIPWNS 159
+GS PW+P +GT R+ + + + D T + F FYR WN+
Sbjct: 78 QGSRPWQPRTCIGTFYREAHFGMHETPYVLYNSDKDATESKNSCFVVVKDDGFYR--WNN 135
Query: 158 NAQAEKKTLP 129
N + K P
Sbjct: 136 NKRIWDKVFP 145
>At5g28250.1 68418.m03425 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 939
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 506 NTNSLKRT*RTNIDQTRXRPASASRPNPTRPGPQS 402
NT L+R + + TR ASA+ N T+P P++
Sbjct: 373 NTVGLRRKQKIPVVDTRTSTASAAAGNGTKPNPEA 407
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 120 ERSGKSFLFCLSVRVPWNPIEG 185
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At5g07700.1 68418.m00883 myb family transcription factor (MYB76)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 338
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 506 NTNSLKRT*RTNIDQTRXRPASASRPNPTRP 414
NT+ KR ID +P ++S PNP P
Sbjct: 109 NTHLKKRLIDDGIDPVTHKPLASSNPNPVEP 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,522,918
Number of Sequences: 28952
Number of extensions: 357440
Number of successful extensions: 1158
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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