Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1316
(734 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 95 2e-18
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 92 1e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 85 2e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 80 5e-14
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 79 1e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 1e-13
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 78 3e-13
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 78 3e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 78 3e-13
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 76 1e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 75 1e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 75 2e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 75 2e-12
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 75 2e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 2e-12
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 75 2e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 75 2e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 74 4e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 73 6e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 73 6e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 73 1e-11
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 71 4e-11
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 69 2e-10
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 66 6e-10
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 66 8e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 66 1e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 66 1e-09
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 65 1e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 65 1e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 65 1e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 65 1e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 64 3e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 63 6e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 62 2e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 58 2e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 56 7e-07
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 56 9e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 55 2e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 55 2e-06
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 53 6e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 52 1e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 52 2e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 50 6e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 49 1e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 47 4e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 46 7e-04
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 45 0.002
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 45 0.002
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 45 0.002
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 45 0.002
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 44 0.004
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 42 0.012
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 41 0.036
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.036
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 40 0.048
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 40 0.048
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 40 0.063
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 39 0.15
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 39 0.15
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 38 0.19
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 38 0.19
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 38 0.34
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 38 0.34
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 37 0.45
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 37 0.45
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 37 0.45
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 37 0.45
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.59
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 37 0.59
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 37 0.59
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.78
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 36 1.0
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 36 1.4
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 36 1.4
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 1.8
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 35 2.4
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 35 2.4
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 35 2.4
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 35 2.4
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 3.1
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.1
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 5.5
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 33 5.5
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 33 7.3
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 33 9.6
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 9.6
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQH
Sbjct: 174 SFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQH 230
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/66 (66%), Positives = 47/66 (71%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI SLH
Sbjct: 89 MAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLH 148
Query: 435 LAGISS 452
LAGISS
Sbjct: 149 LAGISS 154
Score = 83.0 bits (196), Expect = 7e-15
Identities = 44/85 (51%), Positives = 47/85 (55%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 180
+YSTNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 4 LYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMI 63
Query: 181 XXXXXXXXXXXXXN*LVPLILGAPE 255
N LVPL+LGAP+
Sbjct: 64 FFMVMPIMIGGFGNWLVPLMLGAPD 88
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 91.9 bits (218), Expect = 1e-17
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQH
Sbjct: 150 SFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQH 206
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/66 (66%), Positives = 47/66 (71%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI SLH
Sbjct: 65 MAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLH 124
Query: 435 LAGISS 452
LAGISS
Sbjct: 125 LAGISS 130
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE 255
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAP+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPD 64
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = -2
Query: 451 DEIPAKCSXXIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 272
+E PAKC+ I STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 271 IRGNA 257
IRGNA
Sbjct: 138 IRGNA 142
Score = 83.4 bits (197), Expect = 5e-15
Identities = 47/93 (50%), Positives = 53/93 (56%)
Frame = -1
Query: 308 KGGG*ESKSYIIYSWECYSGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 129
K GG + SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 128 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 30
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -3
Query: 684 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 523
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQH
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQH 152
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +3
Query: 261 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHLA 440
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAI SLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 441 GISS 452
G+ S
Sbjct: 73 GVXS 76
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQH
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQH 236
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAI SLH
Sbjct: 95 MAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLH 154
Query: 435 LAGISS 452
L+G+SS
Sbjct: 155 LSGVSS 160
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 174
++STNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFL 67
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N VP+++GAP+
Sbjct: 68 MIFFMVMPAMIGGFGNWFVPILIGAPD 94
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 241 FGHPEVYILILPGF 254
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/66 (59%), Positives = 44/66 (66%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAI SLH
Sbjct: 75 MAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLH 134
Query: 435 LAGISS 452
LAG+SS
Sbjct: 135 LAGVSS 140
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/51 (70%), Positives = 38/51 (74%)
Frame = +2
Query: 527 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQH
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQH 216
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE 255
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAP+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPD 74
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/66 (60%), Positives = 45/66 (68%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAI SLH
Sbjct: 93 MAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLH 152
Query: 435 LAGISS 452
LAGISS
Sbjct: 153 LAGISS 158
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/85 (45%), Positives = 46/85 (54%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 180
++STNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMI 67
Query: 181 XXXXXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 68 FFMVMPIMIGGFGNWLVPLMIGAPD 92
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 234
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 239 FGHPEVYILILPGF 252
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQH
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQH 233
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAI SLH
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLH 151
Query: 435 LAGISS 452
L+GISS
Sbjct: 152 LSGISS 157
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N LVP+++GAP+
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPD 91
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILI+PGF
Sbjct: 238 FGHPEVYILIIPGF 251
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQH
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQH 233
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAI SLH
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLH 151
Query: 435 LAGISS 452
L+GISS
Sbjct: 152 LSGISS 157
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N LVP+++GAP+
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPD 91
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = +2
Query: 506 YSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++ D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQH
Sbjct: 160 FNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQH 217
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
S ++FPR+NN+ F + G GTG TVYPPLS + H G SVDL I
Sbjct: 73 SPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIF 132
Query: 426 SLHLAGISS 452
SLHLAG SS
Sbjct: 133 SLHLAGASS 141
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+P+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPD 75
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 222 FGHPEVYILILPGF 235
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/66 (57%), Positives = 44/66 (66%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AI SLH
Sbjct: 93 MAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLH 152
Query: 435 LAGISS 452
LAG+SS
Sbjct: 153 LAGLSS 158
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQH
Sbjct: 178 TMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQH 234
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/84 (38%), Positives = 41/84 (48%)
Frame = +1
Query: 4 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 183
+S NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N VPL++GAP+
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPD 92
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
+T AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 426 SLHLAGISS 452
+LHL ISS
Sbjct: 150 ALHLTSISS 158
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+H
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEH 234
Score = 42.7 bits (96), Expect = 0.009
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL++GA +
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATD 92
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILI+PGF
Sbjct: 239 FGHPEVYILIIPGF 252
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/69 (57%), Positives = 44/69 (63%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
+T AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 426 SLHLAGISS 452
+LHL ISS
Sbjct: 150 ALHLTSISS 158
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+H
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEH 234
Score = 42.7 bits (96), Expect = 0.009
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL++GA +
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATD 92
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQH
Sbjct: 185 SMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQH 241
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/69 (52%), Positives = 43/69 (62%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
S +AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAI
Sbjct: 97 SPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIF 156
Query: 426 SLHLAGISS 452
SLH++G SS
Sbjct: 157 SLHISGASS 165
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
I+STNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFL 72
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N LVP+++G+P+
Sbjct: 73 MIFFMVMPVMIGGFGNWLVPIMIGSPD 99
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 246 FGHPEVYILILPGF 259
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL I SLH
Sbjct: 81 MAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH 140
Query: 435 LAGISS 452
LAGISS
Sbjct: 141 LAGISS 146
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/80 (42%), Positives = 40/80 (50%)
Frame = +1
Query: 16 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 195
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 196 XXXXXXXXN*LVPLILGAPE 255
N L+PL++GAP+
Sbjct: 61 PIMIGGFGNWLIPLMIGAPD 80
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 646
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL I SLH
Sbjct: 92 MAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH 151
Query: 435 LAGISS 452
LAG+SS
Sbjct: 152 LAGVSS 157
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +1
Query: 4 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 183
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPD 91
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 233
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 238 FGHPEVYILILPGF 251
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL I SLH
Sbjct: 92 MAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH 151
Query: 435 LAGISS 452
LAG+SS
Sbjct: 152 LAGVSS 157
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 233
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +1
Query: 4 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 183
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPD 91
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 238 FGHPEVYILILPGF 251
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL I SLH
Sbjct: 92 MAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLH 151
Query: 435 LAGISS 452
LAG+SS
Sbjct: 152 LAGVSS 157
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 233
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/85 (43%), Positives = 45/85 (52%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 180
++STNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMI 66
Query: 181 XXXXXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 67 FFMVMPIMIGGFGNWLVPLMIGAPD 91
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 238 FGHPEVYILILPGF 251
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 73.3 bits (172), Expect = 6e-12
Identities = 39/69 (56%), Positives = 45/69 (65%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
+T ++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 90 ATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 426 SLHLAGISS 452
SLHL ISS
Sbjct: 150 SLHLTSISS 158
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQH 234
Score = 40.7 bits (91), Expect = 0.036
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N ++PL++GA +
Sbjct: 66 MIFFLAMPALIGGFGNYMLPLMIGATD 92
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1
Query: 661 PNFISTFILIFGHPEVYILILPGF 732
P F FGHPEVYILI+PGF
Sbjct: 229 PIFYQHAFWFFGHPEVYILIIPGF 252
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAI SLH
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLH 151
Query: 435 LAGISS 452
L+GISS
Sbjct: 152 LSGISS 157
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N LVP+++GAP+
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPD 91
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
+T AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAI
Sbjct: 90 ATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIF 149
Query: 426 SLHLAGISS 452
+LH+ ISS
Sbjct: 150 ALHMTSISS 158
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+H
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEH 234
Score = 40.7 bits (91), Expect = 0.036
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDI LY EL PG L G++Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAIL 65
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N ++PL++GA +
Sbjct: 66 MIFFMVMPALIGGFGNYMLPLMIGATD 92
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQH 339
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ + +++ GAG G T YPP+S+ R+VD AI ++H
Sbjct: 198 MAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVH 257
Query: 435 LAGISS 452
++G SS
Sbjct: 258 VSGASS 263
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = +2
Query: 521 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQH 237
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/66 (48%), Positives = 36/66 (54%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
++FPR+NN F E G GTG TVYPPLSS +H G SVDL I S H
Sbjct: 96 MSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFH 155
Query: 435 LAGISS 452
L GI S
Sbjct: 156 LVGIGS 161
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 242 FGHPEVYILILPGF 255
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/66 (50%), Positives = 40/66 (60%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+ FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAI LH
Sbjct: 93 MGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLH 152
Query: 435 LAGISS 452
L+GISS
Sbjct: 153 LSGISS 158
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQH
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQH 234
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 183
S+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL LG P+
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPD 92
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILI+PGF
Sbjct: 239 FGHPEVYILIIPGF 252
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQH
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQH 276
Score = 54.0 bits (124), Expect = 4e-06
Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAI 422
+AFPR+NNI F V NGAGTG TVY PLS++ G +VD+AI
Sbjct: 132 MAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAI 190
Query: 423 XSLHLAGISS 452
SLH+AG SS
Sbjct: 191 LSLHIAGASS 200
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1
Query: 661 PNFISTFILIFGHPEVYILILPGF 732
P FGHPEVYI+ILPGF
Sbjct: 271 PELYQHLFWFFGHPEVYIMILPGF 294
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXS 428
+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI S
Sbjct: 8 MAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = +1
Query: 532 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFGHP 702
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIF P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWTP 153
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/66 (46%), Positives = 39/66 (59%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL I LH
Sbjct: 119 MAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLH 178
Query: 435 LAGISS 452
L+GISS
Sbjct: 179 LSGISS 184
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQH
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQH 260
Score = 41.5 bits (93), Expect = 0.021
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 183
S+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N L+P+++G P+
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPD 118
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILI+PGF
Sbjct: 265 FGHPEVYILIIPGF 278
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AI
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 SLHLAGISS 452
+LHL+G+SS
Sbjct: 167 ALHLSGLSS 175
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AI
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 SLHLAGISS 452
+LHL+G+SS
Sbjct: 167 ALHLSGLSS 175
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AI
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 SLHLAGISS 452
+LHL+G+SS
Sbjct: 167 ALHLSGLSS 175
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIX 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AI
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 SLHLAGISS 452
+LHL+G+SS
Sbjct: 167 ALHLSGLSS 175
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 64.5 bits (150), Expect = 3e-09
Identities = 38/85 (44%), Positives = 44/85 (51%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 180
+ STNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMI 67
Query: 181 XXXXXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 68 FXMXMPIMIGGFGNWLVPLMIGAPD 92
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 380
+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 93 MAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 63.3 bits (147), Expect = 6e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAI 422
+AFPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAI
Sbjct: 121 MAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAI 180
Query: 423 XSLHLAGISS 452
+LHL+G+SS
Sbjct: 181 FALHLSGVSS 190
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +2
Query: 596 ITILLTDRNLNTSFFDPAGGGDPILYQH 679
IT++LTDRN NTSFF+ AGGGDPIL+QH
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQH 259
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 183
STN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL++G P+
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPD 120
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILI+PGF
Sbjct: 264 FGHPEVYILIIPGF 277
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/66 (50%), Positives = 40/66 (60%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLAI SLH
Sbjct: 98 MAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLH 157
Query: 435 LAGISS 452
L+G SS
Sbjct: 158 LSGFSS 163
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQH
Sbjct: 184 YENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQH 239
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL+LGA +
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASD 97
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = +2
Query: 500 K*YSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
K +SF LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH
Sbjct: 177 KFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQH 236
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+ FPR+NN+ F + E G G G T+YP L H + D + ++H
Sbjct: 95 MVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVH 154
Query: 435 LAGISS 452
L GISS
Sbjct: 155 LLGISS 160
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 330 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHLAGISS 452
+VE G G G TVYPPL+S + H G SVD AI SLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQH
Sbjct: 187 TLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQH 243
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
I + NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVL 75
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N ++PL+LGAPE
Sbjct: 76 MIFFLVMPILIGGFGNWMLPLMLGAPE 102
Score = 37.5 bits (83), Expect = 0.34
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 103 MAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLH 161
Query: 435 LAGISS 452
GI S
Sbjct: 162 TVGIGS 167
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 174
++STNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFL 68
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N VP+++G+P+
Sbjct: 69 MIFFMVMPAMIGGFGNWFVPILIGSPD 95
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N LVP+++GAP+
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPD 91
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 389
+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE 255
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAP+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPD 75
Score = 34.7 bits (76), Expect = 2.4
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFPR+NN+ F + G + PL G SVDLAI LH
Sbjct: 76 MAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLH 133
Query: 435 LAGISS 452
LAG+SS
Sbjct: 134 LAGVSS 139
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2
Query: 587 AGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
A IT+LL DRN T+FF+P+GGGDPIL+QH
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQH 323
Score = 36.3 bits (80), Expect = 0.78
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 342 GAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHLAGISS 452
G G G T+YPPLS G VD + SLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 35.1 bits (77), Expect = 1.8
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVY+LILPGF
Sbjct: 328 FGHPEVYVLILPGF 341
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/66 (43%), Positives = 35/66 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+A PR+ N+ F + G G VYPP SS +AH +VDL I LH
Sbjct: 82 MAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLH 141
Query: 435 LAGISS 452
LAGISS
Sbjct: 142 LAGISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
++ PR+NN+ + G G G T+YPPLS++ G +DLA+ SLH
Sbjct: 94 LSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLH 153
Query: 435 LAGISS 452
+AG+SS
Sbjct: 154 MAGMSS 159
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 587 AGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
A +T+LL DR+ +TSF+ P GGGDPIL+QH
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQH 236
Score = 37.1 bits (82), Expect = 0.45
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +1
Query: 7 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 186
S NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 187 XXXXXXXXXXXN*LVPLIL 243
N +PL++
Sbjct: 71 FVMPTSIGGLGNWFIPLMI 89
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILP F
Sbjct: 241 FGHPEVYILILPAF 254
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QH
Sbjct: 193 SLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQH 249
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 506 YSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
Y+F + LFV + AGA+T+L D+ L T+FF+PA GGDP++YQ+
Sbjct: 132 YTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQN 189
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 535 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 687
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 497 IK*YSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 676
IK +PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQ
Sbjct: 184 IKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQ 243
Query: 677 H 679
H
Sbjct: 244 H 244
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 521 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQH 217
Score = 34.3 bits (75), Expect = 3.1
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+ FPR+N + F ++ + A G T YPPLSS SV+ ++ SLH
Sbjct: 87 LLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLH 137
Query: 435 LAGISS 452
LAGI+S
Sbjct: 138 LAGIAS 143
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
F ++P+FV G +LL D + TSFF P GGGDP+L+QH
Sbjct: 204 FFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQH 259
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +2
Query: 515 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q+
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQY 66
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +3
Query: 372 PLSSNIAHRGRSVDLAIXSLHLAGISS 452
PL+S+IAH G SVD+AI SLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 619
+ D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 118 TLDRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 590 GAITILLTDRNLNTSFFDPAGGGDPILYQH 679
G + +LL+D + NT FFDP GDPILYQH
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQH 239
Score = 43.2 bits (97), Expect = 0.007
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAI 422
S +A+PRIN+I E G GTG T+YPPLS+++ +VD+ I
Sbjct: 94 SPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVII 153
Query: 423 XSLHLAGISS 452
L ++G++S
Sbjct: 154 FGLLVSGVAS 163
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILP F
Sbjct: 244 FGHPEVYILILPAF 257
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL+LGA +
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASD 97
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S ++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH
Sbjct: 196 SLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQH 252
Score = 37.5 bits (83), Expect = 0.34
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 679 FILIFGHPEVYILILPGF 732
+ IFGHPEVYILILPGF
Sbjct: 253 YFWIFGHPEVYILILPGF 270
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S Q+PL + ++ A A+ +LLTDR + FF+PA GGDPI Y H
Sbjct: 179 SLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAH 235
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+ +PR+N +E G+GTG T+YPPLS+++++ G +D I L
Sbjct: 100 VVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLL 157
Query: 435 LAGISS 452
AGI+S
Sbjct: 158 AAGIAS 163
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 539 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++ +T+F ++ DR+ NT FF+ + GDP+LYQH
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQH 239
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYI+ILPGF
Sbjct: 244 FGHPEVYIMILPGF 257
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 40.3 bits (90), Expect = 0.048
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQH 679
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QH
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQH 259
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 40.3 bits (90), Expect = 0.048
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 174
+YSTN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVL 65
Query: 175 XXXXXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL++GA +
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGASD 92
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 39.9 bits (89), Expect = 0.063
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S D+LP+ V + + A +L DRN T FFD A GG P+L+QH
Sbjct: 213 SIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQH 269
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILY 673
++ +LPL + + +TA A +LL DR+ T FF GGGDPIL+
Sbjct: 210 TYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILW 269
Query: 674 QH 679
QH
Sbjct: 270 QH 271
Score = 37.1 bits (82), Expect = 0.45
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIXSL 431
+AFPR+N F G AG G T Y PLS+N+ G L + ++
Sbjct: 124 MAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAI 183
Query: 432 HLAGISS 452
+ G+SS
Sbjct: 184 FVTGVSS 190
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQH 252
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +2
Query: 254 NSIPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT 394
+ P NK +KIL TPL Y N C K C + +NSLP Y T
Sbjct: 76 HGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLT 122
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
+ +++PLFV + AF A LL DR+ T FF P GGD +L+QH
Sbjct: 195 TLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQH 251
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 38.3 bits (85), Expect = 0.19
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 620 NLNTSFFDPAGGGDPILYQH 679
N T+FFDPAGGGD IL+QH
Sbjct: 191 NYYTTFFDPAGGGDXILFQH 210
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 215 FGHPEVYILILPGF 228
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 37.5 bits (83), Expect = 0.34
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 147
++STNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 676
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQ 242
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 664 NFISTFILIFGHPEVYILILPGF 732
NF++ F L FGHPEVYILILP F
Sbjct: 294 NFLNMFWL-FGHPEVYILILPAF 315
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 593 AITILLTDRNLNTSFFDPAGGGDPILYQH 679
AIT LL DRN+N++ +D GDP+LYQH
Sbjct: 217 AITGLLLDRNINSTIYDVI--GDPVLYQH 243
Score = 36.7 bits (81), Expect = 0.59
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLA 419
++ ++ PR+N I F ++ +G T+YPPLS+ A G ++DL+
Sbjct: 99 TSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLS 158
Query: 420 IXSLHLAGISS 452
+ +H+ GISS
Sbjct: 159 LLVVHVLGISS 169
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 37.1 bits (82), Expect = 0.45
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 168
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 593 AITILLTDRNLNTSFFDPAGGGDPILYQH 679
A+ +LL DRN T+FF A GGDPI +QH
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIFWQH 287
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIXS 428
+AFPRIN I F ++ A T T+Y PLS ++ +VD+ +
Sbjct: 147 MAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLG 204
Query: 429 LHLAGISS 452
LHL G+S+
Sbjct: 205 LHLTGVSA 212
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.59
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 FDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQH 679
+++L +FV A + AF G A+T+L D+ + T FFD A GGD + YQ+
Sbjct: 178 WNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQN 233
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 36.7 bits (81), Expect = 0.59
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Frame = +2
Query: 497 IK*YSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG---- 652
+K SF +LPL + A ITA A +L+ DR+L TSFF AG
Sbjct: 225 VKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALH 284
Query: 653 --GGDPILYQH 679
GG P+L+QH
Sbjct: 285 HQGGSPVLFQH 295
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 36.7 bits (81), Expect = 0.59
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 168
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +1
Query: 7 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 186
+ +HKDIG LY EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLF 149
Query: 187 XXXXXXXXXXXN*LVPLILGAPE 255
N L+PL++GA +
Sbjct: 150 LFATPIIAAFSNYLIPLLIGADD 172
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2
Query: 593 AITILLTDRNLNTSFFDPAGGGDPILYQH 679
AI +LL DRN TSFF AG G IL+QH
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQH 318
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S +++P+FV AV + +F A +L DR FF A GDPIL+QH
Sbjct: 200 SLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQH 255
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 593 AITILLTDRNLNTSFFDPAGGGDPILYQH 679
A+ ++ DR+ T+FF+ A GGDPIL QH
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQH 394
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 691 FGHPEVYILILPGF 732
FGHPEVYILILPGF
Sbjct: 3 FGHPEVYILILPGF 16
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 631
+ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 161 TMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 147
++STNHKDIGT Y EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 619 KLKYIIF*SCWRRRPNFISTFILIFGHP 702
K KYIIF S W F+STFILIF P
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTP 34
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 688 IFGHPEVYILILPGF 732
IFGHPEVYILILP F
Sbjct: 246 IFGHPEVYILILPAF 260
Score = 32.7 bits (71), Expect = 9.6
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
++ +LPLF + + + +++ DR T+FF+P GG+ ++++H
Sbjct: 186 TYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEH 242
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIXSL 431
+AFPR+N + + E+GA G T+Y PL++ I G +DLA ++
Sbjct: 100 LAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAI 159
Query: 432 HLAGIS 449
L +S
Sbjct: 160 FLFSLS 165
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 3.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 12 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 95
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLH 434
+AFP +NN+ F ++ G T Y PL+SN G + + L
Sbjct: 132 VAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQ 191
Query: 435 LAGISS 452
+AGI +
Sbjct: 192 IAGIGT 197
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.5 bits (73), Expect = 5.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 614 DRNLNTSFFDPAGGGDPILYQH 679
+R + FFDP GGDP+L+QH
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQH 275
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 33.5 bits (73), Expect = 5.5
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Frame = +2
Query: 518 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 664
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 665 ILYQH 679
+L+QH
Sbjct: 278 LLWQH 282
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 33.1 bits (72), Expect = 7.3
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Frame = +2
Query: 587 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQH 679
AGAI +LL +R+L FF DPA GDP L+QH
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQH 243
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 32.7 bits (71), Expect = 9.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 509 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 679
S ++P+ + + TAF +L +R L FFD GGDP+L+QH
Sbjct: 219 SLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQH 275
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 9.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 672 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 535
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,250,980
Number of Sequences: 1657284
Number of extensions: 9593999
Number of successful extensions: 21389
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 19898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21266
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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