Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1313
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 212 RIWVRTGATSPRLW 171
           R+W R  A + RLW
Sbjct: 536 RVWPRAAAAAERLW 549


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 358 HRPHPLPVQTRHAPVLRANPYS 293
           +R HPL + + H  +L  NP S
Sbjct: 332 NRCHPLSLSSDHQAMLHHNPMS 353


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 212 RIWVRTGATSPRLW 171
           RIW R+ A + R+W
Sbjct: 525 RIWPRSAAFAERIW 538


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 68  TRATLKESACSPWP 109
           TR TLK +  SP+P
Sbjct: 256 TRTTLKNNRASPYP 269


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 462 NRLTFRTGSGPAFSGLR 512
           N LTF T S    SGLR
Sbjct: 122 NTLTFHTSSNLTVSGLR 138


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 462 NRLTFRTGSGPAFSGLR 512
           N LTF T S    SGLR
Sbjct: 122 NTLTFHTSSNLTVSGLR 138


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 433 LYIFNMTLAKIVLRFGLDPDPRSP 504
           L +  + LA +V  F  DP  R+P
Sbjct: 444 LLVSKVALASVVKDFVFDPTERTP 467


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,854
Number of Sequences: 336
Number of extensions: 3785
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)