Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1313
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   2.1  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   2.1  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   2.1  
BT022842-1|AAY55258.1|  565|Drosophila melanogaster IP12986p pro...    29   6.4  
BT022817-1|AAY55233.1|  585|Drosophila melanogaster IP13186p pro...    29   6.4  
AE014297-1901|AAF55100.1|  560|Drosophila melanogaster CG14857-P...    29   6.4  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 379 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLP 257
           T++  TR     LP +T  +P     PYSEV  P    PLP
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLP 110


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 379 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLP 257
           T++  TR     LP +T  +P     PYSEV  P    PLP
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLP 110


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 379 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLP 257
           T++  TR     LP +T  +P     PYSEV  P    PLP
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLP 110


>BT022842-1|AAY55258.1|  565|Drosophila melanogaster IP12986p
           protein.
          Length = 565

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 464 SSYVSDWIRTRVLRPPRIFLAVSRVGFVSCAIGTIL 571
           S ++   +++RV R    FLA+   G +SCA+G  L
Sbjct: 375 SGFIQGLLQSRVGRKATAFLAMLCTGLLSCALGVAL 410


>BT022817-1|AAY55233.1|  585|Drosophila melanogaster IP13186p
           protein.
          Length = 585

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 464 SSYVSDWIRTRVLRPPRIFLAVSRVGFVSCAIGTIL 571
           S ++   +++RV R    FLA+   G +SCA+G  L
Sbjct: 395 SGFIQGLLQSRVGRKATAFLAMLCTGLLSCALGVAL 430


>AE014297-1901|AAF55100.1|  560|Drosophila melanogaster CG14857-PA
           protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 464 SSYVSDWIRTRVLRPPRIFLAVSRVGFVSCAIGTIL 571
           S ++   +++RV R    FLA+   G +SCA+G  L
Sbjct: 370 SGFIQGLLQSRVGRKATAFLAMLCTGLLSCALGVAL 405


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,679,715
Number of Sequences: 53049
Number of extensions: 785730
Number of successful extensions: 2019
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)