Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1310
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   0.95 
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   2.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.8  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   3.8  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   3.8  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    24   5.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.7  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.9  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -2

Query: 131 NSSRTSRRRLQATLGYPVEQSFLKTRERLLKRFRCRVPEL 12
           NSSRT+ RRLQATL   +  S++   +  L+    R+P++
Sbjct: 350 NSSRTAIRRLQATLTGKMLDSWIS--QMKLQSTMVRLPKM 387


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 440 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 345
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 392 LALRTGACRVWTGSGCGRCRVWSM 463
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 456 QTRHRPHPLPVQTRHAPVLRANPYSEVT 373
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 456 QTRHRPHPLPVQTRHAPVLRANPYSEVT 373
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -2

Query: 137 KENSSRTSRRRLQATLGYPVEQSFLKTRERLLKRFRCRVPE 15
           K++SS  + R  +    YP EQS +++++    R    +P+
Sbjct: 29  KQDSSNNNNRTTEL-FAYPAEQSAIESKQNARNRTPIFIPK 68


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 93   FGLPRRTIVFKDEGTI 46
            FG+P++ +  KD GT+
Sbjct: 1660 FGMPKQIVELKDTGTV 1675


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 93   FGLPRRTIVFKDEGTI 46
            FG+P++ +  KD GT+
Sbjct: 1661 FGMPKQIVELKDTGTV 1676


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 193 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 74
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 193 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 74
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,215
Number of Sequences: 2352
Number of extensions: 16888
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)