Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1310
(678 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.38
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.38
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.38
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.2
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 8.2
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 8.2
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 664 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 566
RT SC SR + +RH+ +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRS 258
Score = 21.4 bits (43), Expect = 8.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 149 RSGRKENS-----SRTSRRRLQATLGYPVEQSFLKTRERLLKR 36
R R E+S SRT RL+ + ++Q + ERL K+
Sbjct: 16 RQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKK 58
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 653 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 552
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 653 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 552
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 653 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 552
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 74 QSFLKTRERLLKRFRCRVPE 15
QS LKT ++L + C VPE
Sbjct: 106 QSLLKTADQLKIKGLCEVPE 125
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 192 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 109
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/29 (24%), Positives = 15/29 (51%)
Frame = -1
Query: 303 LRIWVRTGATSPRTSLTEFSRSAESIRTP 217
++ W+ G T + S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 677 VERRSYRIVPIAHETKPTRLTARKIRGRPEN 585
VE + Y+ V I+ T+P+ T + P N
Sbjct: 183 VEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 123 PDLSAASSGHFGLPRRTIVFK 61
PDL+ S G GLP + +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,922
Number of Sequences: 438
Number of extensions: 5212
Number of successful extensions: 31
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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