Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1309
(588 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p pro... 42 5e-04
AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.1... 42 5e-04
AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA ... 42 5e-04
U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 38 0.010
BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 38 0.010
AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 38 0.010
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr... 32 0.66
AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab pr... 32 0.66
AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-P... 32 0.66
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P... 32 0.66
AE014296-2841|AAS64983.1| 146|Drosophila melanogaster CG13027-P... 32 0.66
AE014298-764|AAF46054.1| 623|Drosophila melanogaster CG15776-PA... 31 1.5
AE013599-3157|AAF46695.3| 436|Drosophila melanogaster CG9480-PA... 29 6.2
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 28 8.2
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 28 8.2
>AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p
protein.
Length = 375
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 480 GYPRLLVQHIRNVSMLSEMMQEHDEPILKCLQDIKV 587
G PR + +NV +LSE++Q+HDEP+L+ L D+++
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEPLLESLMDVRL 212
>AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.18
protein.
Length = 375
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 480 GYPRLLVQHIRNVSMLSEMMQEHDEPILKCLQDIKV 587
G PR + +NV +LSE++Q+HDEP+L+ L D+++
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEPLLESLMDVRL 212
>AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA
protein.
Length = 375
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 480 GYPRLLVQHIRNVSMLSEMMQEHDEPILKCLQDIKV 587
G PR + +NV +LSE++Q+HDEP+L+ L D+++
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEPLLESLMDVRL 212
>U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome
assembly protein NAP-1 protein.
Length = 370
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 477 KGYPRLLVQHIRNVSMLSEMMQEHDEPILKCLQDIKV 587
KG P + RN +++SEM+Q HDEP ++ L DI +
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLIDISI 180
>BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p
protein.
Length = 370
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 477 KGYPRLLVQHIRNVSMLSEMMQEHDEPILKCLQDIKV 587
KG P + RN +++SEM+Q HDEP ++ L DI +
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLIDISI 180
>AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA
protein.
Length = 370
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 477 KGYPRLLVQHIRNVSMLSEMMQEHDEPILKCLQDIKV 587
KG P + RN +++SEM+Q HDEP ++ L DI +
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLIDISI 180
>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
protein.
Length = 2175
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +1
Query: 304 RALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKG 483
+A++V+ E +D+ + DD E+E+ R NA T+ E K K P+D NV
Sbjct: 555 QAMLVDS--EEAEDKPEDSHHDDDEDEDEDREAVNATTTDSNELKIKKEQHSPLDLNVLS 612
Query: 484 IPDFWYNISGMSQCSAK*CKNMMNQF 561
P+ + + +A C N N+F
Sbjct: 613 -PNSAIAAAAAAAAAAA-CANDPNKF 636
>AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab
protein.
Length = 1084
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 349 CLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPP 462
CL PW + T++EE + A ++ E +E D PP
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSDNRKYPP 406
>AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-PA
protein.
Length = 1084
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 349 CLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPP 462
CL PW + T++EE + A ++ E +E D PP
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSDNRKYPP 406
>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
isoform A protein.
Length = 2175
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +1
Query: 304 RALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKG 483
+A++V+ E +D+ + DD E+E+ R NA T+ E K K P+D NV
Sbjct: 555 QAMLVDS--EEAEDKPEDSHHDDDEDEDEDREAVNATTTDSNELKIKKEQHSPLDLNVLS 612
Query: 484 IPDFWYNISGMSQCSAK*CKNMMNQF 561
P+ + + +A C N N+F
Sbjct: 613 -PNSAIAAAAAAAAAAA-CANDPNKF 636
>AE014296-2841|AAS64983.1| 146|Drosophila melanogaster CG13027-PA
protein.
Length = 146
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +1
Query: 328 YEPNDDECLNPWRDDTEEEELARA----VQNAAITEGEE--KKDDKAIEPPMDPNVKGIP 489
+E +CLNP R + E + R V+N + E E K+ +PP+DPN I
Sbjct: 15 FETKKAKCLNPPRTARKVESVIRECQDEVRNKLVNEAYEILKEQVSQNQPPIDPNDDSID 74
Query: 490 DFWYNI 507
W ++
Sbjct: 75 FIWPSV 80
>AE014298-764|AAF46054.1| 623|Drosophila melanogaster CG15776-PA
protein.
Length = 623
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 355 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDP 471
NP ++ EEE+ + ++ E EE+ DDK+ PP P
Sbjct: 187 NPDEEEEEEEQEQASQEDTPKEEDEEEDDDKSTPPPPLP 225
>AE013599-3157|AAF46695.3| 436|Drosophila melanogaster CG9480-PA,
isoform A protein.
Length = 436
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 316 VNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIE 456
V Y+P + NP DDT+EEE+ + I GE K+ K IE
Sbjct: 362 VKTVYDPVPSQKSNP--DDTDEEEIIEEYEEEIIEPGE--KNVKTIE 404
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 367 DDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPN 474
DD EEE+ A+ + E++ +K EPP+ P+
Sbjct: 1679 DDDEEEQQAKKEKEREREREREREKEKLEEPPLKPS 1714
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 373 TEEEELARAVQNAAITEGEEKKDDKAIEP 459
TE+ ELA++V AA ++ ++KK+ +EP
Sbjct: 1355 TEDAELAKSVTPAAPSKKDKKKNKTVVEP 1383
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,644,626
Number of Sequences: 53049
Number of extensions: 480788
Number of successful extensions: 1806
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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