Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1306
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   1.6  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   1.6  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   1.6  
AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p pro...    30   3.6  
AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA...    30   3.6  
AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P...    29   4.8  
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    29   4.8  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    29   4.8  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   4.8  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 201 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 73
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 201 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 73
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 201 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 73
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p
           protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 655 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTFRALGEITLRQHPRGP 476
           R  G L N + ++    T+   TLRE   +P   R C++ F  TF  + +  L  H   P
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTFN-VDQANLSMHETLP 594

Query: 475 SQ 470
            +
Sbjct: 595 EE 596


>AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA
           protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 655 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTFRALGEITLRQHPRGP 476
           R  G L N + ++    T+   TLRE   +P   R C++ F  TF  + +  L  H   P
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTFN-VDQANLSMHETLP 594

Query: 475 SQ 470
            +
Sbjct: 595 EE 596


>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
            isoform E protein.
          Length = 2403

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 417  LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 310
            +TVE R  + RI P   E +P RP G E+P  AGE G+
Sbjct: 1433 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 417  LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 310
            +TVE R  + RI P   E +P RP G E+P  AGE G+
Sbjct: 6240 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 417  LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 310
            +TVE R  + RI P   E +P RP G E+P  AGE G+
Sbjct: 1433 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 417  LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 310
            +TVE R  + RI P   E +P RP G E+P  AGE G+
Sbjct: 6240 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,990,577
Number of Sequences: 53049
Number of extensions: 744860
Number of successful extensions: 1863
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)