Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1305
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein. 33 0.85
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 33 0.85
X00734-1|CAA25318.1| 444|Homo sapiens tubulin 5-beta protein. 31 3.4
BC111374-1|AAI11375.1| 447|Homo sapiens TUBB6 protein protein. 31 4.5
BC002654-1|AAH02654.1| 446|Homo sapiens tubulin, beta 6 protein. 31 4.5
AK022340-1|BAB14016.1| 446|Homo sapiens protein ( Homo sapiens ... 31 4.5
V00599-1|CAA23844.1| 437|Homo sapiens protein ( Human mRNA frag... 30 7.9
J00314-1|AAB59507.1| 444|Homo sapiens protein ( Human beta-tubu... 30 7.9
BX248307-8|CAM25935.1| 372|Homo sapiens tubulin beta polypeptid... 30 7.9
BX248307-7|CAM25934.1| 426|Homo sapiens tubulin beta polypeptid... 30 7.9
BX248307-6|CAM25933.1| 444|Homo sapiens tubulin beta polypeptid... 30 7.9
BC103746-1|AAI03747.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein. 30 7.9
BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein. 30 7.9
BC070326-1|AAH70326.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC062532-1|AAH62532.1| 124|Homo sapiens TUBB protein protein. 30 7.9
BC021909-1|AAH21909.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC020946-1|AAH20946.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC019924-1|AAH19924.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC015889-1|AAH15889.1| 266|Homo sapiens TUBB protein protein. 30 7.9
BC013374-1|AAH13374.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC007605-1|AAH07605.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC005838-1|AAH05838.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC002347-1|AAH02347.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC001938-1|AAH01938.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
BC001896-1|AAH01896.1| 340|Homo sapiens TUBB protein protein. 30 7.9
BA000025-69|BAB63321.1| 444|Homo sapiens Beta-tubulin protein. 30 7.9
AL845353-25|CAI41894.1| 372|Homo sapiens tubulin, beta polypept... 30 7.9
AL845353-24|CAI41893.1| 426|Homo sapiens tubulin, beta polypept... 30 7.9
AL845353-23|CAI41892.1| 444|Homo sapiens tubulin, beta polypept... 30 7.9
AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar t... 30 7.9
AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar t... 30 7.9
AL662848-9|CAI17442.1| 372|Homo sapiens tubulin, beta protein. 30 7.9
AL662848-8|CAM24851.1| 426|Homo sapiens tubulin, beta protein. 30 7.9
AL662848-7|CAI17441.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
AL662797-13|CAI18197.1| 372|Homo sapiens tubulin, beta protein. 30 7.9
AL662797-12|CAM25516.1| 426|Homo sapiens tubulin, beta protein. 30 7.9
AL662797-11|CAI18196.1| 444|Homo sapiens tubulin, beta protein. 30 7.9
AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein. 30 7.9
AF141349-1|AAD33873.1| 444|Homo sapiens beta-tubulin protein. 30 7.9
AF070600-1|AAC28654.1| 444|Homo sapiens beta-tubulin protein. 30 7.9
AF070593-1|AAC28650.1| 444|Homo sapiens beta-tubulin protein. 30 7.9
AF070561-1|AAC28642.1| 444|Homo sapiens beta-tubulin protein. 30 7.9
AB202098-1|BAE78618.1| 444|Homo sapiens beta 5-tubulin protein. 30 7.9
AB103606-1|BAF31267.1| 444|Homo sapiens beta-tubulin protein pr... 30 7.9
AB088100-1|BAC54932.1| 444|Homo sapiens tubulin, beta polypepti... 30 7.9
AB062393-1|BAB93480.1| 444|Homo sapiens beta 5-tubulin protein. 30 7.9
>X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein.
Length = 850
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 582 RSRETISHLCYTSHVSLQCQTRVKLTGSSFPADSPKP 472
R+RE S LCY + +QC T + + SS PA + P
Sbjct: 453 RNREQASGLCYNYQIRVQCCTPLACSTSSSPAQTTPP 489
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 582 RSRETISHLCYTSHVSLQCQTRVKLTGSSFPADSPKP 472
R+RE S LCY + +QC T + + SS PA + P
Sbjct: 1457 RNREQASGLCYNYQIRVQCCTPLPCSTSSSPAQTTPP 1493
>X00734-1|CAA25318.1| 444|Homo sapiens tubulin 5-beta protein.
Length = 444
Score = 31.1 bits (67), Expect = 3.4
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
S+ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 SKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC111374-1|AAI11375.1| 447|Homo sapiens TUBB6 protein protein.
Length = 447
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
++ SSY +WI V D+P R + S ++ +R ++ +
Sbjct: 335 NKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAF 394
Query: 238 IKTKHWMALAGVDAM*FLPSALNVN-----VKKFKQARVNGG 348
+ HW G+D M F + N+N ++++ A VN G
Sbjct: 395 L---HWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATVNDG 433
>BC002654-1|AAH02654.1| 446|Homo sapiens tubulin, beta 6 protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.5
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
S+ SSY +WI V D+P R + S ++ +R ++ +
Sbjct: 335 SKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAF 394
Query: 238 IKTKHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
+ HW G+D M F + N+N V +++Q
Sbjct: 395 L---HWFTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AK022340-1|BAB14016.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ12278 fis, clone MAMMA1001735, highly similar to
TUBULIN BETA-5 CHAIN. ).
Length = 446
Score = 30.7 bits (66), Expect = 4.5
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
S+ SSY +WI V D+P R + S ++ +R ++ +
Sbjct: 335 SKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAF 394
Query: 238 IKTKHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
+ HW G+D M F + N+N V +++Q
Sbjct: 395 L---HWFTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>V00599-1|CAA23844.1| 437|Homo sapiens protein ( Human mRNA
fragment encoding beta-tubulin. (from clone D-beta-1).
).
Length = 437
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 328 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 382
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 383 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 417
>J00314-1|AAB59507.1| 444|Homo sapiens protein ( Human beta-tubulin
gene, clone m40. ).
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BX248307-8|CAM25935.1| 372|Homo sapiens tubulin beta polypeptide
protein.
Length = 372
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 263 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 317
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 318 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 352
>BX248307-7|CAM25934.1| 426|Homo sapiens tubulin beta polypeptide
protein.
Length = 426
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 317 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 371
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 372 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 406
>BX248307-6|CAM25933.1| 444|Homo sapiens tubulin beta polypeptide
protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC103746-1|AAI03747.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 61 RKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
+ SSY +DW+ V D+P R + +S +F + TA+Q + Q +
Sbjct: 333 KNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNN-----TAIQELFKRVSEQFTAMFR 387
Query: 238 IKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 388 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 421
>BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 61 RKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
+ SSY +DW+ V D+P R + +S +F + TA+Q + Q +
Sbjct: 333 KNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNN-----TAIQELFKRVSEQFTAMFR 387
Query: 238 IKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 388 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 421
>BC070326-1|AAH70326.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC062532-1|AAH62532.1| 124|Homo sapiens TUBB protein protein.
Length = 124
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 15 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 69
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 70 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 104
>BC021909-1|AAH21909.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC020946-1|AAH20946.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC019924-1|AAH19924.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC015889-1|AAH15889.1| 266|Homo sapiens TUBB protein protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 157 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 211
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 212 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 246
>BC013374-1|AAH13374.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC007605-1|AAH07605.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC005838-1|AAH05838.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC002347-1|AAH02347.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC001938-1|AAH01938.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BC001896-1|AAH01896.1| 340|Homo sapiens TUBB protein protein.
Length = 340
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 231 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 285
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 286 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 320
>BA000025-69|BAB63321.1| 444|Homo sapiens Beta-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AL845353-25|CAI41894.1| 372|Homo sapiens tubulin, beta polypeptide
protein.
Length = 372
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 263 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 317
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 318 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 352
>AL845353-24|CAI41893.1| 426|Homo sapiens tubulin, beta polypeptide
protein.
Length = 426
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 317 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 371
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 372 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 406
>AL845353-23|CAI41892.1| 444|Homo sapiens tubulin, beta polypeptide
protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 435
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 61 RKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
+ SSY +DW+ V D+P R + +S +F + TA+Q + Q +
Sbjct: 336 KNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNN-----TAIQELFKRVSEQFTAMFR 390
Query: 238 IKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 61 RKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
+ SSY +DW+ V D+P R + +S +F + TA+Q + Q +
Sbjct: 302 KNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNN-----TAIQELFKRVSEQFTAMFR 356
Query: 238 IKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 357 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
>AL662848-9|CAI17442.1| 372|Homo sapiens tubulin, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 263 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 317
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 318 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 352
>AL662848-8|CAM24851.1| 426|Homo sapiens tubulin, beta protein.
Length = 426
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 317 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 371
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 372 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 406
>AL662848-7|CAI17441.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AL662797-13|CAI18197.1| 372|Homo sapiens tubulin, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 263 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 317
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 318 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 352
>AL662797-12|CAM25516.1| 426|Homo sapiens tubulin, beta protein.
Length = 426
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 317 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 371
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 372 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 406
>AL662797-11|CAI18196.1| 444|Homo sapiens tubulin, beta protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 61 RKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
+ SSY +DW+ V D+P R + +S +F + TA+Q + Q +
Sbjct: 336 KNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNN-----TAIQELFKRVSEQFTAMFR 390
Query: 238 IKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AF141349-1|AAD33873.1| 444|Homo sapiens beta-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AF070600-1|AAC28654.1| 444|Homo sapiens beta-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AF070593-1|AAC28650.1| 444|Homo sapiens beta-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AF070561-1|AAC28642.1| 444|Homo sapiens beta-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AB202098-1|BAE78618.1| 444|Homo sapiens beta 5-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AB103606-1|BAF31267.1| 444|Homo sapiens beta-tubulin protein
protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AB088100-1|BAC54932.1| 444|Homo sapiens tubulin, beta polypeptide
protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AB062393-1|BAB93480.1| 444|Homo sapiens beta 5-tubulin protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 58 SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
++ SSY +WI V D+P R + ++V+F S TA+Q + Q +
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNS-----TAIQELFKRISEQFTAMF 389
Query: 235 LIKT-KHWMALAGVDAM*FLPSALNVN--VKKFKQ 330
K HW G+D M F + N+N V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,122,544
Number of Sequences: 237096
Number of extensions: 1959798
Number of successful extensions: 3865
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 3641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3781
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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