Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1303
(726 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 27 0.45
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 2.4
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 4.2
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 24 4.2
AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-... 24 5.5
AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative odorant-b... 24 5.5
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 7.3
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 23 9.6
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 9.6
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 9.6
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 27.5 bits (58), Expect = 0.45
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 576 PLVRASSELTVERRSYRIVPIAQKRNRHDLRLGRSAEGRRTRVRIQ 439
P ++ T RRS + P+ +RN H L R+ R V +Q
Sbjct: 1028 PTAGENAYSTTHRRSQTLSPVRNERNYHTLTTTRTHSTERPFVAVQ 1073
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 266 SQSLSEVTDPICRLPLPTLFYR 201
++SLS + P CRLP P L R
Sbjct: 93 TRSLSNLELPSCRLPCPNLIPR 114
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 261 LALRTGACRVWTGSGCGRCRVWSM 332
+++ G V G+ C C VWSM
Sbjct: 5 ISVHVGQAGVQIGNPCWDCTVWSM 28
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 24.2 bits (50), Expect = 4.2
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = -1
Query: 387 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIRSYGSNL-----PTS 223
+R + + T HN + RP TGR R D+ ++ S G+ L P +
Sbjct: 110 VRSGFTLLQTASTPHNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNA 169
Query: 222 LTYIILSTRGSSPWRPAADMGTN 154
T ++ + +P +P +GT+
Sbjct: 170 YTNTTIAVQ-PAPTQPHELVGTD 191
>AY805323-1|AAV66543.1| 459|Anopheles gambiae beta
subunit-GABA-A-gated chloride channelprotein.
Length = 459
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 561 SSELTVERRSYRIVPIAQKRNRH 493
S++ +E + R+ PIA RNRH
Sbjct: 340 SADDIIELQDIRMSPIASLRNRH 362
>AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative
odorant-binding protein OBPjj11 protein.
Length = 135
Score = 23.8 bits (49), Expect = 5.5
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 498 GFVSARSARFCTTAVQRSAQNWHGQGESDCLI-KTKHCDGPRGC*RNVISAQC 653
GFV + Q+ A + GQ ++D L+ + ++ DGP C R+ QC
Sbjct: 74 GFVDQDGSVQTDELTQKLASEY-GQEKADELVARCRNNDGPDACERSFRLLQC 125
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 522 VPIAQKRNRHDLRLGRSAEGRRT 454
VP+ K N H +G A G RT
Sbjct: 535 VPVDVKYNSHSQSIGVGANGHRT 557
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 130 PSPEFSRSAESIRTPPQMRCSSRSEPY 50
P P + + E PP++ C+ E Y
Sbjct: 39 PEPSTTEATEEESPPPKIECTDPREVY 65
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 507 SARSARFCTTAVQRSAQNWHGQGESDCLIKTKHCDGPRGC*RNVISA 647
S R + C T ++ + + E D + + PRG RN I++
Sbjct: 258 STRKSLVCYTTTRQKKEGDAAKPEEDTVRRRSRLRRPRGKRRNTIAS 304
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 507 SARSARFCTTAVQRSAQNWHGQGESDCLIKTKHCDGPRGC*RNVISA 647
S R + C T ++ + + E D + + PRG RN I++
Sbjct: 259 STRKSLVCYTTTRQKKEGDAAKPEEDTVRRRSRLRRPRGKRRNTIAS 305
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,506
Number of Sequences: 2352
Number of extensions: 16954
Number of successful extensions: 51
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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