Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1303
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010311-1|AAQ23629.1|  511|Drosophila melanogaster AT31519p pro...    31   1.6  
AE014134-2482|AAF53383.1|  511|Drosophila melanogaster CG15286-P...    31   1.6  
X55393-1|CAA39067.1|  659|Drosophila melanogaster S59 protein pr...    30   2.8  
AE014297-3018|AAF55901.3|  659|Drosophila melanogaster CG6534-PA...    30   2.8  

>BT010311-1|AAQ23629.1|  511|Drosophila melanogaster AT31519p
           protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -1

Query: 210 ILSTRGSSPWRPAADMGTNRRDISTYIP 127
           ++ TR ++P +PAA++G N R I+ Y P
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGP 343


>AE014134-2482|AAF53383.1|  511|Drosophila melanogaster CG15286-PA
           protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -1

Query: 210 ILSTRGSSPWRPAADMGTNRRDISTYIP 127
           ++ TR ++P +PAA++G N R I+ Y P
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGP 343


>X55393-1|CAA39067.1|  659|Drosophila melanogaster S59 protein
           protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
 Frame = -3

Query: 331 IDQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADFPYLHYSID*RLFTLETCCGYGYE- 155
           ++  RH   P P+Q  HA +L+ +P+     QF      H               + ++ 
Sbjct: 162 LNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQH 221

Query: 154 ----PARHLHVHPSPEFSRSA--ESIRTPPQMRCSSRSEPYLPSI 38
               P  H H HPS  F   A   S   PP    S  S P  P++
Sbjct: 222 PHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAM 266


>AE014297-3018|AAF55901.3|  659|Drosophila melanogaster CG6534-PA
           protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
 Frame = -3

Query: 331 IDQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADFPYLHYSID*RLFTLETCCGYGYE- 155
           ++  RH   P P+Q  HA +L+ +P+     QF      H               + ++ 
Sbjct: 162 LNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQH 221

Query: 154 ----PARHLHVHPSPEFSRSA--ESIRTPPQMRCSSRSEPYLPSI 38
               P  H H HPS  F   A   S   PP    S  S P  P++
Sbjct: 222 PHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAM 266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,732,809
Number of Sequences: 53049
Number of extensions: 777806
Number of successful extensions: 2321
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2321
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)