Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1301
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC...    30   3.0  
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB...    30   3.0  
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA...    30   3.0  
AF067153-1|AAC18395.1| 1171|Drosophila melanogaster PIP82 protei...    29   7.0  
AE014298-1194|AAF46386.3| 1195|Drosophila melanogaster CG11219-P...    29   7.0  
AY113479-1|AAM29484.1|  121|Drosophila melanogaster RE44624p pro...    29   9.2  
AE014134-1844|AAN10745.1|  121|Drosophila melanogaster CG31715-P...    29   9.2  

>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
            isoform C protein.
          Length = 2682

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +3

Query: 498  WTRLSLPSP*KSAIVAVLIVQRQSETVALVHQLNVVFCEYKSELNREALPDDIFG 662
            W  LSLP P K+  V ++   +    +  + Q  +++  Y    N+   P  IFG
Sbjct: 1889 WGTLSLPRPTKTFWVTLIAYTQAIVLIKCIFQFKLIWSNYHQLPNQPLTPAKIFG 1943


>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
            isoform B protein.
          Length = 2720

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +3

Query: 498  WTRLSLPSP*KSAIVAVLIVQRQSETVALVHQLNVVFCEYKSELNREALPDDIFG 662
            W  LSLP P K+  V ++   +    +  + Q  +++  Y    N+   P  IFG
Sbjct: 1927 WGTLSLPRPTKTFWVTLIAYTQAIVLIKCIFQFKLIWSNYHQLPNQPLTPAKIFG 1981


>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
            isoform A protein.
          Length = 2771

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +3

Query: 498  WTRLSLPSP*KSAIVAVLIVQRQSETVALVHQLNVVFCEYKSELNREALPDDIFG 662
            W  LSLP P K+  V ++   +    +  + Q  +++  Y    N+   P  IFG
Sbjct: 1978 WGTLSLPRPTKTFWVTLIAYTQAIVLIKCIFQFKLIWSNYHQLPNQPLTPAKIFG 2032


>AF067153-1|AAC18395.1| 1171|Drosophila melanogaster PIP82 protein
           protein.
          Length = 1171

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 594 ADVQARRSRFDVGR*EQQRWQTSTAMARTDESKSQLEVRSSVGEQQGLL 448
           A+++AR SRF      QQRW+ S  +A+  E        S+ G   G+L
Sbjct: 445 ANLRARLSRFASTEQLQQRWRKSFKVAKEPEELETKAEGSATGGASGVL 493


>AE014298-1194|AAF46386.3| 1195|Drosophila melanogaster CG11219-PA
           protein.
          Length = 1195

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 594 ADVQARRSRFDVGR*EQQRWQTSTAMARTDESKSQLEVRSSVGEQQGLL 448
           A+++AR SRF      QQRW+ S  +A+  E        S+ G   G+L
Sbjct: 469 ANLRARLSRFASTEQLQQRWRKSFKVAKEPEELETKAEGSATGGASGVL 517


>AY113479-1|AAM29484.1|  121|Drosophila melanogaster RE44624p
           protein.
          Length = 121

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 17/73 (23%), Positives = 33/73 (45%)
 Frame = -3

Query: 719 IRNNKMNCMEYAYQLWLQGSKDIVRECFPVEFRLIFAENNIKLMYKRDGLALTLDDENSN 540
           I+N + + ++ A+Q   Q   + ++  FPV +   F + N+       G  +   D++  
Sbjct: 13  IKNGEFDAVQDAFQNDAQKVNEEIKGRFPVHYAADFGQLNVLEFLISLGADINRKDKHGI 72

Query: 539 DGRLLRRWQGQTS 501
              L   W+G TS
Sbjct: 73  TPILAAIWEGHTS 85


>AE014134-1844|AAN10745.1|  121|Drosophila melanogaster CG31715-PA
           protein.
          Length = 121

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 17/73 (23%), Positives = 33/73 (45%)
 Frame = -3

Query: 719 IRNNKMNCMEYAYQLWLQGSKDIVRECFPVEFRLIFAENNIKLMYKRDGLALTLDDENSN 540
           I+N + + ++ A+Q   Q   + ++  FPV +   F + N+       G  +   D++  
Sbjct: 13  IKNGEFDAVQDAFQNDAQKVNEEIKGRFPVHYAADFGQLNVLEFLISLGADINRKDKHGI 72

Query: 539 DGRLLRRWQGQTS 501
              L   W+G TS
Sbjct: 73  TPILAAIWEGHTS 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,316,426
Number of Sequences: 53049
Number of extensions: 728451
Number of successful extensions: 2271
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2271
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)