Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1295
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.6  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.0  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 274 FVKNKCTRTDHIHGRISSLW 333
           ++K KC  +DH    IS+ W
Sbjct: 254 YIKPKCVLSDHGTQFISNTW 273


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 192 LHSIYFKCSFQVFIMYSSFFKV 127
           +HS +    + VF   S+FFK+
Sbjct: 26  IHSYFMVAFYVVFSSVSTFFKI 47


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 192 LHSIYFKCSFQVFIMYSSFFKV 127
           +HS +    + VF   S+FFK+
Sbjct: 26  IHSYFMVAFYVVFSSVSTFFKI 47


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 347 PASRSLCTSQCYQRLYCIVSRENII 421
           P   +LC S+C+   Y +   E+++
Sbjct: 79  PQLHNLCRSECFSTKYFVGCVESLL 103


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 86  HKLPTPISWFSKSGSVLSLG 27
           H++ TP++  +  GSV +LG
Sbjct: 89  HEMATPMATMNSYGSVGTLG 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,301
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)