Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1295
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.8  
AY745224-1|AAU93491.1|  103|Anopheles gambiae cytochrome P450 pr...    23   7.6  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 457 IFGENPQVVTSHLR 498
           ++G   QVVTSHLR
Sbjct: 375 VYGSGYQVVTSHLR 388


>AY745224-1|AAU93491.1|  103|Anopheles gambiae cytochrome P450
           protein.
          Length = 103

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 364 KGTRSRIPYRSISY*FVHVYDLYAY 290
           KGT   +PY SI +   H  D Y Y
Sbjct: 11  KGTTVVLPYYSICFDAEHFADPYKY 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,789
Number of Sequences: 2352
Number of extensions: 11400
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)