Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1292
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 31 3.3
AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein. 31 3.3
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein. 31 3.3
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein. 31 3.3
X79204-1|CAA55793.1| 816|Homo sapiens ataxin-1 protein. 29 9.9
BC117125-1|AAI17126.1| 815|Homo sapiens ataxin 1 protein. 29 9.9
AL009031-2|CAA15622.1| 815|Homo sapiens ataxin 1 protein. 29 9.9
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 285 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 2589 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2646
Query: 105 ATLGYPVEHSF 73
TL +P+ F
Sbjct: 2647 RTLNHPLGGEF 2657
>AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ43705 fis, clone TESOP2001818. ).
Length = 321
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 18 PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAER 125
P+P G+ T ++PS+L+ ++ G P W ED+ R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262
>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
Length = 4025
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 285 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707
Query: 105 ATLGYPVEHSF 73
TL +P+ F
Sbjct: 1708 RTLNHPLGGEF 1718
>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
Length = 2185
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 285 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707
Query: 105 ATLGYPVEHSF 73
TL +P+ F
Sbjct: 1708 RTLNHPLGGEF 1718
>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
Length = 3310
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 285 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 2034 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2091
Query: 105 ATLGYPVEHSF 73
TL +P+ F
Sbjct: 2092 RTLNHPLGGEF 2102
>X79204-1|CAA55793.1| 816|Homo sapiens ataxin-1 protein.
Length = 816
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -2
Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 118
YE +RH+ VHPSP + SG R + +PN + D +E++++ +E S T
Sbjct: 357 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 412
Query: 117 RRLQATLGYPVEHSF 73
+ LG P S+
Sbjct: 413 DKSGLHLGKPGHRSY 427
>BC117125-1|AAI17126.1| 815|Homo sapiens ataxin 1 protein.
Length = 815
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -2
Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 118
YE +RH+ VHPSP + SG R + +PN + D +E++++ +E S T
Sbjct: 356 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 411
Query: 117 RRLQATLGYPVEHSF 73
+ LG P S+
Sbjct: 412 DKSGLHLGKPGHRSY 426
>AL009031-2|CAA15622.1| 815|Homo sapiens ataxin 1 protein.
Length = 815
Score = 29.5 bits (63), Expect = 9.9
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -2
Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 118
YE +RH+ VHPSP + SG R + +PN + D +E++++ +E S T
Sbjct: 356 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 411
Query: 117 RRLQATLGYPVEHSF 73
+ LG P S+
Sbjct: 412 DKSGLHLGKPGHRSY 426
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,045,781
Number of Sequences: 237096
Number of extensions: 2317352
Number of successful extensions: 6612
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6612
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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