Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1285
(453 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens ... 31 1.8
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 29 5.6
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 29 5.6
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 29 5.6
U12259-1|AAA80574.1| 283|Homo sapiens paired box homeotic prote... 29 9.8
U02368-1|AAC50053.1| 836|Homo sapiens PAX3 protein-forkhead tra... 29 9.8
U02309-1|AAA03628.1| 332|Homo sapiens PAX-3 protein. 29 9.8
U02308-1|AAA03627.1| 689|Homo sapiens protein ( Human PAX-3-FKH... 29 9.8
BC114363-1|AAI14364.1| 483|Homo sapiens paired box 3 protein. 29 9.8
BC101302-1|AAI01303.1| 483|Homo sapiens paired box 3 protein. 29 9.8
BC101301-1|AAI01302.1| 484|Homo sapiens paired box 3 protein. 29 9.8
BC101300-1|AAI01301.1| 483|Homo sapiens paired box 3 protein. 29 9.8
BC101299-1|AAI01300.1| 483|Homo sapiens paired box 3 protein. 29 9.8
BC092463-1|AAH92463.1| 524|Homo sapiens 1-acylglycerol-3-phosph... 29 9.8
AY734233-1|AAU34184.1| 524|Homo sapiens Plsc-domain containing ... 29 9.8
AY251280-1|AAP13873.1| 407|Homo sapiens paired box 3 splice var... 29 9.8
AY251279-1|AAP13872.1| 403|Homo sapiens paired box 3 splice var... 29 9.8
AF542964-1|AAN33178.1| 306|Homo sapiens PlSC domain containing ... 29 9.8
>AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ43705 fis, clone TESOP2001818. ).
Length = 321
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 9 PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAER 116
P+P G+ T ++PS+L+ ++ G P W ED+ R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -3
Query: 268 PRTSLXEFS--RSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSG 95
PR SL + A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 164 PRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKAS 223
Query: 94 HFGLPRRTLVFKD 56
GLP +L KD
Sbjct: 224 GVGLPGGSLPIKD 236
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -3
Query: 268 PRTSLXEFS--RSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSG 95
PR SL + A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 164 PRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKAS 223
Query: 94 HFGLPRRTLVFKD 56
GLP +L KD
Sbjct: 224 GVGLPGGSLPIKD 236
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -3
Query: 268 PRTSLXEFS--RSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSG 95
PR SL + A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 171 PRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKAS 230
Query: 94 HFGLPRRTLVFKD 56
GLP +L KD
Sbjct: 231 GVGLPGGSLPIKD 243
>U12259-1|AAA80574.1| 283|Homo sapiens paired box homeotic protein
protein.
Length = 283
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 131 TVHRPQPLPPSTVHQSTIPSNPDS 154
>U02368-1|AAC50053.1| 836|Homo sapiens PAX3 protein-forkhead
transcription factor fusion protein.
Length = 836
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 327 TVHRPQPLPPSTVHQSTIPSNPDS 350
>U02309-1|AAA03628.1| 332|Homo sapiens PAX-3 protein.
Length = 332
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 180 TVHRPQPLPPSTVHQSTIPSNPDS 203
>U02308-1|AAA03627.1| 689|Homo sapiens protein ( Human PAX-3-FKHR
gene fusion mRNA, partial cds. ).
Length = 689
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 180 TVHRPQPLPPSTVHQSTIPSNPDS 203
>BC114363-1|AAI14364.1| 483|Homo sapiens paired box 3 protein.
Length = 483
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 326 TVHRPQPLPPSTVHQSTIPSNPDS 349
>BC101302-1|AAI01303.1| 483|Homo sapiens paired box 3 protein.
Length = 483
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 326 TVHRPQPLPPSTVHQSTIPSNPDS 349
>BC101301-1|AAI01302.1| 484|Homo sapiens paired box 3 protein.
Length = 484
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 327 TVHRPQPLPPSTVHQSTIPSNPDS 350
>BC101300-1|AAI01301.1| 483|Homo sapiens paired box 3 protein.
Length = 483
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 326 TVHRPQPLPPSTVHQSTIPSNPDS 349
>BC101299-1|AAI01300.1| 483|Homo sapiens paired box 3 protein.
Length = 483
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 326 TVHRPQPLPPSTVHQSTIPSNPDS 349
>BC092463-1|AAH92463.1| 524|Homo sapiens 1-acylglycerol-3-phosphate
O-acyltransferase 7 (lysophosphatidic acid acyltrans
protein.
Length = 524
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3
Query: 409 APVLRANPYSEVTDPICRLP--LPTLFYRLEALH---LGDLLR 296
APVL A P+S DPI LP LP + R E L +G LLR
Sbjct: 121 APVLVAAPHSTFFDPIVLLPCDLPKVVSRAENLSVPVIGALLR 163
>AY734233-1|AAU34184.1| 524|Homo sapiens Plsc-domain containing
protein protein.
Length = 524
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3
Query: 409 APVLRANPYSEVTDPICRLP--LPTLFYRLEALH---LGDLLR 296
APVL A P+S DPI LP LP + R E L +G LLR
Sbjct: 121 APVLVAAPHSTFFDPIVLLPCDLPKVVSRAENLSVPVIGALLR 163
>AY251280-1|AAP13873.1| 407|Homo sapiens paired box 3 splice
variant PAX3H protein.
Length = 407
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 327 TVHRPQPLPPSTVHQSTIPSNPDS 350
>AY251279-1|AAP13872.1| 403|Homo sapiens paired box 3 splice
variant PAX3G protein.
Length = 403
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 451 TRHRPHPLPVETRHAPVLRANPYS 380
T HRP PLP T H + +NP S
Sbjct: 327 TVHRPQPLPPSTVHQSTIPSNPDS 350
>AF542964-1|AAN33178.1| 306|Homo sapiens PlSC domain containing
hypothetical protein protein.
Length = 306
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3
Query: 409 APVLRANPYSEVTDPICRLP--LPTLFYRLEALH---LGDLLR 296
APVL A P+S DPI LP LP + R E L +G LLR
Sbjct: 121 APVLVAAPHSTFFDPIVLLPCDLPKVVSRAENLSVPVIGALLR 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,408,169
Number of Sequences: 237096
Number of extensions: 1654751
Number of successful extensions: 4790
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4790
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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