Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1280
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 81 4e-14
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve... 75 1e-12
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 62 1e-08
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa... 56 1e-06
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 56 1e-06
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu... 55 2e-06
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep... 50 5e-05
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN... 40 0.064
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;... 39 0.15
UniRef50_UPI000065CC01 Cluster: Tyrosine-protein kinase SgK269 (... 37 0.45
UniRef50_Q0RHW3 Cluster: Putative reductase; n=1; Frankia alni A... 36 0.79
UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ... 35 2.4
UniRef50_P37697 Cluster: Cellulose-complementing protein; n=2; G... 35 2.4
UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8; ... 33 5.6
UniRef50_Q5YMC9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A6BKX8 Cluster: Putative uncharacterized protein; n=8; ... 33 7.4
UniRef50_Q0E208 Cluster: Os02g0282600 protein; n=1; Oryza sativa... 33 7.4
UniRef50_Q0DGP9 Cluster: Os05g0519000 protein; n=4; Oryza sativa... 33 7.4
UniRef50_UPI000051D666 Cluster: hypothetical protein LOC389384; ... 33 9.7
UniRef50_Q700W1 Cluster: PopP1 protein; n=6; Proteobacteria|Rep:... 33 9.7
UniRef50_Q4Q7Q6 Cluster: Putative uncharacterized protein; n=3; ... 33 9.7
UniRef50_Q5TD95 Cluster: OTTHUMP00000017070; n=3; Eutheria|Rep: ... 33 9.7
UniRef50_Q5TD94 Cluster: Radial spokehead-like protein 3; n=26; ... 33 9.7
>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 144
Score = 80.6 bits (190), Expect = 4e-14
Identities = 44/81 (54%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -3
Query: 418 QTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSPRTSSPEFS 239
Q H P+LRANPY EVTD CRLPL TLFY+LEA+HLGDLLR+ VR G + S FS
Sbjct: 58 QGPHCPILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSVRPGMKT--IPSCGFS 115
Query: 238 RSAESIRTPPQ-MRCSSRSEP 179
R+ P Q + SS P
Sbjct: 116 RAVAGAPDPAQGLGSSSHKTP 136
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = -1
Query: 717 LDSRIPLVRASSELTV---ERRSYRIVPIAHETKP 622
LDS+IPLVR SS+L V +RRS R +P T+P
Sbjct: 1 LDSQIPLVRTSSKLIVNCSKRRSTRDLPRPSTTRP 35
>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 123
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = -3
Query: 403 PVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSPRTSSPEFSRSAES 224
P LRANP+ EVTD CRLPLPTLFY+ EA HLGDLLR+ VR + PEFSR+ ES
Sbjct: 63 PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVR--PDTKINVFPEFSRAVES 120
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2
Query: 398 PQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTN 279
PQSQS RSYGS LPTSL YI+ STRG SPWRP A +G N
Sbjct: 224 PQSQSFSRSYGSILPTSLAYIVPSTRGCSPWRPDAFVGGN 263
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/56 (44%), Positives = 29/56 (51%)
Frame = -1
Query: 738 HRNALF*LDSRIPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRPENAGP 571
HRNALF L+SRIPLVR SSEL V R P R A + R ++ P
Sbjct: 154 HRNALFKLNSRIPLVRTSSELAVRRPGKAPEGTVPSPSPGRHAATRSRRGSSSSSP 209
>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
Aa1-330 - Rattus norvegicus (Rat)
Length = 151
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -1
Query: 321 RLFTLETCCGYGYEPARHLHVHPHLNFQGPQRVSGHRRKCGALR 190
RLFTLETCCGYGY PAR LH P + F+G + ++G RR A +
Sbjct: 25 RLFTLETCCGYGYGPARDLHPLPRI-FKGQRELTGRRRNRDAFQ 67
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -1
Query: 321 RLFTLETCCGYGYEPARHLHVHPHLNFQGPQRVSGHRRKCGALR 190
RLFTLETCCGYGY PAR LH P + F+G + ++G RR A +
Sbjct: 95 RLFTLETCCGYGYGPARDLHPLPRI-FKGQRELTGRRRNRDAFQ 137
Score = 34.3 bits (75), Expect = 3.2
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Frame = -2
Query: 377 RSYGSNLPTSLTYIILSTRGSSPWRPAADMGTN-RRDISTYILT*IFKVRREYPDTAANA 201
+SYGS LPTSLTYI+ + + G RD+ + L IFK +RE N
Sbjct: 76 KSYGSGLPTSLTYIVPTCQRLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNR 133
Query: 200 VLFAFRTIS----PFY-RIPWNSNAQAEKKTLPGPLGGVFMPLWVTP 75
F S PF +P+ + P G V +P W TP
Sbjct: 134 DAFQGTGPSLGANPFQGALPFTKKRELSPGLPPASPGSVALPHW-TP 179
>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
Euteleostomi|Rep: RRNA promoter binding protein - Rattus
norvegicus (Rat)
Length = 295
Score = 54.8 bits (126), Expect = 2e-06
Identities = 42/120 (35%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Frame = -3
Query: 439 RPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFY-----RLEALHLGDLLRIWVRTG 275
RP PL AP P + P R+ L Y EA+HLGDLLRIWVR G
Sbjct: 142 RPAPL-----RAPARPTQPLEPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPG 196
Query: 274 ATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 95
A S P+F A + RTPP+ R R P G L ++++ P A S
Sbjct: 197 ARFT-PSPPDFQGPARAHRTPPEPRRFPRHGPLSRGEPIPGRPALHKEKRTLPGAPAGFS 255
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/85 (41%), Positives = 40/85 (47%)
Frame = -1
Query: 432 IRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSID*RLFTLETCCGYGYEPARHLHVHP 253
+R P++P P EPILIPKLRI+ ADFPYLH S L P P
Sbjct: 146 LRAPARPTQPL--EPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPGARFTPSP 203
Query: 252 HLNFQGPQRVSGHRRKCGALRVPNH 178
+FQGP R HR R P H
Sbjct: 204 P-DFQGPAR--AHRTPPEPRRFPRH 225
>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
acetyl choline receptor - Acheta domesticus (House
cricket)
Length = 39
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -3
Query: 376 EVTDPICRLPLPTLFYRLEALHLG 305
EVTDPICRLPLPT YRL+ALHLG
Sbjct: 16 EVTDPICRLPLPTFVYRLDALHLG 39
>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence; n=3;
Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 136
Score = 39.9 bits (89), Expect = 0.064
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +2
Query: 194 RAPHLRRCPDTLCGP*KFR*GCTWRCRAGSYPYPQQVSKVKSL 322
+A RR P + P K R G + RAG YPYPQQVSKV SL
Sbjct: 89 KASRFRRRPVSSRWPLKIR-GRGCKSRAGPYPYPQQVSKVNSL 130
>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
n=3; Eukaryota|Rep: Putative senescence-associated
protein - Plasmodium yoelii yoelii
Length = 205
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3
Query: 736 SQCFVLIRQSDSPCPCQF 683
SQC+VLI+QSDSPCP QF
Sbjct: 188 SQCYVLIKQSDSPCPFQF 205
>UniRef50_UPI000065CC01 Cluster: Tyrosine-protein kinase SgK269 (EC
2.7.10.2) (Sugen kinase 269).; n=1; Takifugu
rubripes|Rep: Tyrosine-protein kinase SgK269 (EC
2.7.10.2) (Sugen kinase 269). - Takifugu rubripes
Length = 1791
Score = 37.1 bits (82), Expect = 0.45
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -3
Query: 286 VRTGATSPRTSSP--EFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPD 113
V T +TSPR P EF + + P CS +S P P G +RT+ K +
Sbjct: 557 VWTSSTSPRQKIPKGEFGLRSHPGPSSPIHPCSHKSAPTSPIAGLSSSRTVPVKSPNLSE 616
Query: 112 LSAASSCHFGLPRRTLVFKDE 50
+ S + G+P ++ +DE
Sbjct: 617 IKFNSFNNAGMPPFPIIIRDE 637
>UniRef50_Q0RHW3 Cluster: Putative reductase; n=1; Frankia alni
ACN14a|Rep: Putative reductase - Frankia alni (strain
ACN14a)
Length = 172
Score = 36.3 bits (80), Expect = 0.79
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Frame = -3
Query: 367 DPICRLPLPTLF------YRLEALHLGDLLRI--WVR-TGATSPRTSSPEFSRSAESIRT 215
+P C LP+ T +R+ A G R+ W R G S R S+P R+ + RT
Sbjct: 86 EPRCTLPVDTKMKCERPDHRVSAPRFGSTARVIVWTRMAGHLSARRSAPRRWRTPSTART 145
Query: 214 PPQMRCSSRS 185
P+ RC RS
Sbjct: 146 TPRRRCGGRS 155
>UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 39
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 329 IE*CR*GKSANWIRNFGIRIGSE 397
+E CR GKSA IRNFG RIGSE
Sbjct: 1 MEQCRQGKSAKRIRNFGKRIGSE 23
>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
50803
Length = 329
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2
Query: 395 QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMG 285
QS S R YG+ LPTSL+ + RG P PAA G
Sbjct: 290 QSHSFSRGYGAGLPTSLSRVRSRARGCWPRSPAAWWG 326
>UniRef50_P37697 Cluster: Cellulose-complementing protein; n=2;
Gluconacetobacter xylinus|Rep: Cellulose-complementing
protein - Acetobacter xylinus (Gluconacetobacter
xylinus)
Length = 353
Score = 34.7 bits (76), Expect = 2.4
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Frame = -3
Query: 424 PVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDL-LRIWVRTGATSPRTSSP 248
PV APV A P + VT P R+ P ++ + G R+ R+ PRTS+
Sbjct: 165 PVPPDPAPVTPA-PQARVTGPNTRMVEPFSRPQVRTVQEGATPSRVPSRSMNAFPRTSAS 223
Query: 247 EFSRS------AESIRTPPQMRCSSRSEPYLPSIGF--HGTRTLRQKRKLFPDLSAASSC 92
S A+ P+ R S R P + F G R R ++K FP +++ S
Sbjct: 224 SISERPVDRGVADEWSPVPKARLSPRERPRPGDLSFFFQGMRDTRDEKKFFP-VASTRSV 282
Query: 91 HFGLPRRTLVFKDEGTIIETVPLPGSGIGT 2
+ R T + K + T PGS + +
Sbjct: 283 RSNVSRMTSMTKTD-TNSSQASRPGSPVAS 311
>UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8;
Bacteria|Rep: Putative uncharacterized protein -
Corynebacterium efficiens
Length = 261
Score = 33.5 bits (73), Expect = 5.6
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 405 PRSSEPILIPKLRIQFADFPYLHYSID*RL--FTLETCCGYGYEPARHL 265
P + L+PKLR FA+F L++S RL L TC G GY P H+
Sbjct: 95 PSPVQAPLLPKLRGHFAEF--LNHSSPERLSILYLTTCVGLGYGPNMHI 141
>UniRef50_Q5YMC9 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 147
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -3
Query: 265 PRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKR 128
PR P A IRTPPQ C P LPS+ F+ R +R
Sbjct: 11 PRRRRPPHGGKARGIRTPPQTGC----HPRLPSVSFYDAALPRVQR 52
>UniRef50_A6BKX8 Cluster: Putative uncharacterized protein; n=8;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 109
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2
Query: 386 SLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGT 282
S RSYG LP+SLT ++ S G SP P + GT
Sbjct: 13 SFSRSYGVILPSSLTMLLPSALGFSPHPPVSVYGT 47
>UniRef50_Q0E208 Cluster: Os02g0282600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os02g0282600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 190
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 286 VRTGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFP 116
VRT ++S +SS R + ++ TPP S + P + S H R+ +R+L P
Sbjct: 27 VRTSSSSMGSSSARQRRRSSALPTPPHHAASDSAPPPVASAPLHHARSGGPRRQLCP 83
>UniRef50_Q0DGP9 Cluster: Os05g0519000 protein; n=4; Oryza
sativa|Rep: Os05g0519000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 255
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -3
Query: 442 HRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSP 263
HRP P P + P L +P + V I P PT F + + ++++ + T P
Sbjct: 31 HRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVVQMLTGSDTTPP 90
Query: 262 RTSSP 248
P
Sbjct: 91 SQRPP 95
>UniRef50_UPI000051D666 Cluster: hypothetical protein LOC389384;
n=9; Eutheria|Rep: hypothetical protein LOC389384 - Homo
sapiens
Length = 652
Score = 32.7 bits (71), Expect = 9.7
Identities = 29/112 (25%), Positives = 40/112 (35%)
Frame = -3
Query: 463 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWV 284
T D RH P P H A E D + P+ + L +L +V
Sbjct: 51 TTSDWARHSDSPAPSAEAHCTTAAAPTPEETGDFLPSEQRPS--QDTKKGWLKTMLNFFV 108
Query: 283 RTGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKR 128
RTG PR + R E I P+ + EP L H + R+K+
Sbjct: 109 RTGPEEPRERASRRPRGKEGISQHPE-PLEAAGEPALRKKAHHDKKPSRKKQ 159
>UniRef50_Q700W1 Cluster: PopP1 protein; n=6; Proteobacteria|Rep:
PopP1 protein - Ralstonia solanacearum (Pseudomonas
solanacearum)
Length = 368
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 280 TGATSPRTSSPEFSR--SAESIRTPPQMRCSSRSEPYLPSI 164
T TSP ++PE SR S ES R+P +R SR+ P L +
Sbjct: 21 TDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSEL 61
>UniRef50_Q4Q7Q6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 485
Score = 32.7 bits (71), Expect = 9.7
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = -3
Query: 436 PHPLPVQTRHAPV-LRANPYSEVTDPICRLPLPTLFYRL-EALHLGDLLRIWVRTGATSP 263
P P P H+P + + +DP+ R P+LF RL ++ G L W ATSP
Sbjct: 192 PPPTPAGLPHSPPPTQPDTDKGPSDPVGRFSPPSLFQRLRQSWQRGSGLA-W-EAHATSP 249
Query: 262 RTSSPEFSRSAESIRTPPQ 206
SSP+ + S R P+
Sbjct: 250 TPSSPDGALSVGIARVSPR 268
>UniRef50_Q5TD95 Cluster: OTTHUMP00000017070; n=3; Eutheria|Rep:
OTTHUMP00000017070 - Homo sapiens (Human)
Length = 469
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 310 LGDLLRIWVRTGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLP 170
LG+ R W A SP+ S PE S E+ + P R S S P+ P
Sbjct: 17 LGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSP 63
>UniRef50_Q5TD94 Cluster: Radial spokehead-like protein 3; n=26;
Eumetazoa|Rep: Radial spokehead-like protein 3 - Homo
sapiens (Human)
Length = 716
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 310 LGDLLRIWVRTGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLP 170
LG+ R W A SP+ S PE S E+ + P R S S P+ P
Sbjct: 17 LGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSP 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,881,040
Number of Sequences: 1657284
Number of extensions: 17441830
Number of successful extensions: 55427
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 52431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55395
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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