Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1275
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0058 + 440328-440437,440514-440733,441605-441805,441915-44... 89 3e-18
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 33 0.18
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 31 0.73
10_08_0659 + 19647037-19647464,19647569-19647659,19648998-196490... 30 1.7
03_02_0992 + 13049871-13050449 30 1.7
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.2
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 29 2.9
01_05_0629 + 23809899-23810720 29 2.9
01_05_0307 - 20701860-20702168,20702291-20703083,20703183-207032... 29 2.9
09_04_0503 - 18170645-18170858,18171029-18171222,18171419-181716... 29 3.9
02_05_0789 + 31766300-31767056,31767316-31767659 29 3.9
02_04_0537 - 23734010-23734715,23735326-23735333 29 3.9
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 29 3.9
05_04_0142 - 18372751-18373338 28 5.1
11_04_0250 + 15335457-15335882 28 6.8
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 28 6.8
09_03_0083 + 12174586-12174843,12175774-12175833 28 6.8
08_02_1059 + 24006493-24006999 28 6.8
05_04_0262 - 19514426-19515625 28 6.8
03_06_0628 - 35179951-35180265,35180653-35180889,35180982-351811... 28 6.8
03_02_0836 - 11637618-11637962 28 6.8
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 28 6.8
01_01_0648 - 4917123-4917651,4917728-4917857,4917958-4918093 28 6.8
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 8.9
11_01_0050 - 384860-384874,384942-385325,385426-385914,386057-38... 27 8.9
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 27 8.9
05_05_0175 + 22966151-22967614 27 8.9
04_04_0713 + 27490547-27491401 27 8.9
01_06_0772 - 31864564-31864653,31864733-31864816,31865547-318656... 27 8.9
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 27 8.9
>01_01_0058 +
440328-440437,440514-440733,441605-441805,441915-441985,
442058-442217,444166-444492,444529-444759,444869-445249,
445573-445648,445736-445799,446334-446469,447666-447710,
447851-447916
Length = 695
Score = 88.6 bits (210), Expect = 3e-18
Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = +2
Query: 74 VRFQKFTIGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSE----NRPEYPATLILSAD 241
+RF KFTIGHAW +DYG SDN+ +F +L+KYSPLHN++ P E N +YPA ++L+AD
Sbjct: 585 LRFHKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTAD 644
Query: 242 HDDR 253
HDDR
Sbjct: 645 HDDR 648
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 3 VAACINQRPDLYGAAVVQVGVLDM 74
+AAC+NQRPDL+G A+ VGV+DM
Sbjct: 561 IAACVNQRPDLFGCALAHVGVMDM 584
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 266 LAEVRGRTAARGGALVRRSARRCSPGSTPRRGTAAENPPLKLLTNTLISYVS 421
L E RGR RG L R ++R SP + GTAA P + T+ I +V+
Sbjct: 371 LHEERGRPEQRGIDLRNRLSQRGSPKAETTAGTAAAPPVAAIATSPAIGWVA 422
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 31.1 bits (67), Expect = 0.73
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 155 LLKYSPL-HNIQPPSENRPEYPATLILSADHD-DRGCAALAEVRGRTAARGGALVRRSAR 328
LL++ P+ H+ + P++ + A L+++A D G + A A G A RR AR
Sbjct: 88 LLRHPPVAHDPESPAQRWLDDVAKLVMTARQRLDAGGRSSATKASGAATTGSASSRRRAR 147
Query: 329 RCSPGSTPRRGTAAENPPLK 388
R + T + PP +
Sbjct: 148 RAAAAVRHSAATPSSTPPTR 167
>10_08_0659 +
19647037-19647464,19647569-19647659,19648998-19649039,
19649179-19649237,19649559-19649634,19649735-19649866,
19650251-19650358,19651040-19651094,19651187-19651437
Length = 413
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -1
Query: 371 PPPCPALVSNLASSGARCAGRAPRHVLQFG-HELQRVQRTRGRRGPPTVSASPGIRADSR 195
PP P + + R RH+L F H L ++R V A+ G+ AD+
Sbjct: 41 PPELPPFPHSPSPRHPRAGQALDRHLLPFSLHHLAGLRRRGFSSAAGEVDAAAGVLADAA 100
Query: 194 SAAE 183
+AAE
Sbjct: 101 AAAE 104
>03_02_0992 + 13049871-13050449
Length = 192
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 266 LAEVRGRTAARGGALVRRSARRCSPGSTPRRGTAAENPPLKLLTNT 403
L + G RGG L RR P + RG A+ +PPL T T
Sbjct: 64 LLALAGSRIGRGGVLPPHRHRRSVPPPSLGRGVASTSPPLHAATVT 109
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 173 LHNIQPPSENRPEYPATLILSADHDDRGCAALAE--VRGRTAARGGALVRRSARRCSPGS 346
L + PP P PA+L SA +RGC A+A V GR RG +R+ + G+
Sbjct: 433 LEALAPPP---PAAPASL--SASGGERGCVAIANAAVAGRGRGRGSG-AKRAPTAVTVGA 486
Query: 347 TPRRGTAAENPPLK 388
P + P K
Sbjct: 487 PPPQARTPAAAPAK 500
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 128 SDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL-ILSADHDDRGCAAL-AEVRGRTAARG 301
S+ +T + + + PL+ ++ P EN P + +L A D G AL AEV+ + +RG
Sbjct: 123 SEEQTMCDSMKERRPLYMLKGPLENAPPVRDFVGVLKASFDRTGLPALIAEVKKASPSRG 182
>01_05_0629 + 23809899-23810720
Length = 273
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 345 EPGEQRRALRRTSAPPRAAVRPR-TSASAAHPRSSWSADSISVAGYSGRF 199
EP E A S P A PR TSA A+ P + A + + A +GRF
Sbjct: 155 EPSEADPAATDASEPSEADPAPRATSADASEPSEADPAATAASASSAGRF 204
>01_05_0307 -
20701860-20702168,20702291-20703083,20703183-20703278,
20703391-20703518
Length = 441
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 167 SPLHNIQPP-SENRPEYPATLILSADHDDRGCAALAEVRGRTAARGGA 307
+PL I PP S + + + L+L +DHDD + + G A GGA
Sbjct: 19 NPLAAIPPPCSSSSSSWSSQLLLLSDHDDVLLHSAGDHGGAVAGIGGA 66
>09_04_0503 -
18170645-18170858,18171029-18171222,18171419-18171629,
18172162-18172553,18172926-18173054,18173353-18173487,
18173885-18174088,18174716-18174771,18174793-18174950,
18175864-18176231
Length = 686
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 3 VAACINQRPDLYGAAVVQVGVLDM 74
V A IN PDL+ AAV++V LD+
Sbjct: 534 VGAVINMLPDLFSAAVLKVPFLDI 557
>02_05_0789 + 31766300-31767056,31767316-31767659
Length = 366
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Frame = -1
Query: 371 PPPCPALVSNL------ASSGARCAGRAPRHVLQFGHELQRVQR 258
PPP PAL L +GA C GRA HVL L R
Sbjct: 73 PPPPPALAPALPRADPGCPAGASCVGRALAHVLSVASRLPVASR 116
>02_04_0537 - 23734010-23734715,23735326-23735333
Length = 237
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 318 RRTSAPPRAAVRPRTSASAAHP 253
RR+ A PR A PR+S + AHP
Sbjct: 124 RRSPASPRTASSPRSSRARAHP 145
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -1
Query: 410 ISVCSSIILVVGFPPPCPALVSNLASSGARCAGRAPR--HVLQFGHEL-QRVQRTRGRRG 240
+SVC PPP PA ++ A+S A R R V++F H L +R R+R G
Sbjct: 281 LSVCGRAAAPPPPPPPPPARRTSGAASPAASGPRVTRVPEVVEFYHSLMRRDSRSRDGSG 340
Query: 239 PPTVSASPGIRA 204
+ G+ A
Sbjct: 341 GGETANGGGVAA 352
>05_04_0142 - 18372751-18373338
Length = 195
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -3
Query: 339 GEQRRALRRTSAPPRAAVRPRTSASAAHPRSSWSADSIS 223
GE R ALRR PP + ++AS+++P +S SA S S
Sbjct: 22 GEGRGALRRRRQPPTSG----SAASSSYPSTSGSAGSSS 56
>11_04_0250 + 15335457-15335882
Length = 141
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 221 TLILSADHDDRGCAALAEVRGRTAARGGALVRRSARR 331
TL+ AD RGCA L + R +RGG RR
Sbjct: 8 TLVAEADVQRRGCAVL-RISDRRQSRGGPTAGGGVRR 43
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 395 SIILVVGFPPPCPALVSNLASSGARCAGRAPRHVLQFGHELQRVQ 261
S ++ VGF C A++ +L+ G R +LQ G +RVQ
Sbjct: 292 SYLVAVGFVKECGAMLQDLSPQGLHAIFERFRGILQEGEIDKRVQ 336
>09_03_0083 + 12174586-12174843,12175774-12175833
Length = 105
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 372 SAAVPR-LGVEPGEQRRALRRTSAPPRAAVRPRTSASAAHPRSSWSADSISVA 217
SAA PR LGV GE+RR +R+ TS S + RS + A++ +VA
Sbjct: 25 SAARPRQLGVA-GERRRRVRQLEVTGEQQREEETSGSPSPLRSLFGAEAEAVA 76
>08_02_1059 + 24006493-24006999
Length = 168
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -3
Query: 381 GGFSAAVPRLGVEPGEQRRALRRTSAPPRAAVRPRTSASAAHPRSSWSADSI 226
GG +A V + P RR +APP A R T+ SAA SS SA+ +
Sbjct: 40 GGLAADVAPMEATPPSASSLSRRGTAPP-VANRFATADSAASTYSSRSAEDM 90
>05_04_0262 - 19514426-19515625
Length = 399
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 467 GNIYHFTNFRPKACVMKHRISVCSSIILVVGFPPPCPALVSNLASSG 327
G YH + P+A ++ H S S+ + P PCP VS L S G
Sbjct: 22 GGAYHVQS-NPQAALLFHSYS--STAVTGGSDPEPCPDTVSYLVSCG 65
>03_06_0628 -
35179951-35180265,35180653-35180889,35180982-35181140,
35181673-35181864,35182696-35182983,35183289-35183342,
35183561-35183671,35183780-35184011,35184097-35184302
Length = 597
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 342 PGEQRRALRRTSAPPRAAVRPRTSASAA 259
P R RR APP A RPR +AA
Sbjct: 12 PPPPRHCARRPRAPPTTAPRPRRGCAAA 39
>03_02_0836 - 11637618-11637962
Length = 114
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = -3
Query: 333 QRRALRRTSAPPRAAVRPRTSASAAHPRSSWSADSISVAGYSGRFSLGG*MLC 175
+RRA R A A R R SWS DS+S G GR GG C
Sbjct: 12 ERRAYRYGQASSPTA---RAVGQLGCIRKSWSNDSLSSYGGGGRAGGGGAQAC 61
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -3
Query: 375 FSAAVPRLGVEPGEQRRALRRTSAPPRAAVRPRTSASAAH 256
FS+ + + RRAL + PP + RP T+ + +H
Sbjct: 151 FSSTATKSSLPDAGARRALSQEPPPPPTSERPTTAGAGSH 190
>01_01_0648 - 4917123-4917651,4917728-4917857,4917958-4918093
Length = 264
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 324 ALRRTSAPPRAAVRPRTSASAAHPRSSWSADS-ISVAGYSG 205
ALR A A TSASAA S+WSAD+ + V G G
Sbjct: 180 ALRDPFADGAATDGGSTSASAASSGSNWSADTGVVVVGGGG 220
>12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 119 YGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRGCAALA 271
YG N T+ +K + P S RP +P T S RG ++LA
Sbjct: 872 YGDIVNITRIFCSIKRCNIQKYPPTSTTRPSFPPTSTTSPSFLGRGQSSLA 922
>11_01_0050 -
384860-384874,384942-385325,385426-385914,386057-386233
Length = 354
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 116 DYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPA 220
DYGS K + E L+ P+H I P P+Y A
Sbjct: 21 DYGSWTLKQKLEDLINCDPIHGIMP---KNPKYKA 52
>10_08_0352 +
17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 139 DPVRVLAEVLALTQHSAAERESARIPGDADTVGGPR 246
D +R +A+VL+ ++ + ++ R+P D D PR
Sbjct: 503 DTLRSMAQVLSHGENLTGDAQAQRLPSDGDAPFAPR 538
>05_05_0175 + 22966151-22967614
Length = 487
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 278 RGRTAARGGALV--RRSARRCSPGSTPRRGTAAENPPLKLLTNTLISY 415
R T RG V R A + + ++PRR T+ E PPL + + +S+
Sbjct: 429 RSATDGRGSPRVTGERRAGKPAAAASPRRSTSGEIPPLSPPSESWLSH 476
>04_04_0713 + 27490547-27491401
Length = 284
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +2
Query: 170 PLHNIQPPSENRPEYPATLILSADHDDRGCAA--LAEVRGRTAARGGALVRRSARRCSPG 343
P H + E PA A D C+ A G+ A GG S+ C+
Sbjct: 47 PKHAAKKRKRAAAEEPANAAHGAGEDTSSCSTDDNAAASGKAQAGGGGGGVDSSSTCTAA 106
Query: 344 STPRRG 361
S PR G
Sbjct: 107 SAPRSG 112
>01_06_0772 -
31864564-31864653,31864733-31864816,31865547-31865603,
31865700-31865828,31866704-31866790,31866856-31866933,
31867150-31867306,31868000-31868141,31868835-31868986,
31869118-31869371,31869819-31869896
Length = 435
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 525 VFLVYFIILCAFVWIIILLWQHLSFYKLQTQSLRH 421
+F+ YF+ + FVW I+ L + Y+ + + H
Sbjct: 152 MFICYFLYIAGFVWFILTLKKKTYKYQFKQYAWTH 186
>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
23187887-23188159,23188275-23188338,23188479-23188744,
23188951-23189045,23189544-23189718,23190669-23191063,
23191830-23191953,23192864-23192959,23193049-23193120,
23194687-23194824,23195369-23195549,23195602-23195963,
23196944-23197386,23197461-23197763,23197857-23198081,
23198260-23198350,23198702-23198779,23198939-23199229,
23199316-23199513,23199681-23200163,23200488-23200562,
23201163-23201324,23201400-23201729,23201816-23201916,
23202477-23202581,23202931-23203162,23203913-23204257,
23204346-23204447,23206010-23206153,23206463-23206551,
23206979-23207061,23207172-23207287,23207824-23207909,
23208461-23208560,23209270-23209335
Length = 2451
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 312 TSAPPRAAVRPRTSASAAHPRSSWSA 235
T PP+ +R R S+ + RSSW A
Sbjct: 1658 TKTPPKDILRKRKSSGSGGERSSWEA 1683
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,818,878
Number of Sequences: 37544
Number of extensions: 330158
Number of successful extensions: 1401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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