Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1275
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / proly... 89 2e-18
At1g20380.1 68414.m02542 prolyl oligopeptidase, putative / proly... 86 2e-17
At1g69020.1 68414.m07897 prolyl oligopeptidase family protein si... 33 0.20
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 29 2.4
At5g66960.1 68418.m08442 prolyl oligopeptidase family protein si... 28 5.7
At5g66850.1 68418.m08428 protein kinase family protein contains ... 27 7.5
At4g17410.1 68417.m02607 expressed protein 27 7.5
At4g18570.1 68417.m02749 proline-rich family protein common fami... 27 9.9
At1g33980.1 68414.m04213 Smg-4/UPF3 family protein contains Pfam... 27 9.9
>At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|Q9QUR6 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Mus
musculus}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 89.4 bits (212), Expect = 2e-18
Identities = 37/64 (57%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Frame = +2
Query: 74 VRFQKFTIGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRP----EYPATLILSAD 241
+RF KFTIGHAW SDYG S+N+ +F +L+KYSPLHN++ P E + +YP+T++L+AD
Sbjct: 598 LRFHKFTIGHAWTSDYGCSENEEEFHWLIKYSPLHNVKRPWEQQTDHLVQYPSTMLLTAD 657
Query: 242 HDDR 253
HDDR
Sbjct: 658 HDDR 661
Score = 44.0 bits (99), Expect = 8e-05
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 3 VAACINQRPDLYGAAVVQVGVLDM 74
V ACINQRPDLYG A+ VGV+DM
Sbjct: 574 VGACINQRPDLYGCALAHVGVMDM 597
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 346 DTKAGHGGGKPTTKIIDEHTDILCFMTQALGLKFVK 453
+ KAGHG G+PT K+IDE D FM + + + +
Sbjct: 696 EVKAGHGAGRPTQKMIDEAADRYSFMAKMVNASWTE 731
>At1g20380.1 68414.m02542 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|P48147 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Homo
sapiens}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 85.8 bits (203), Expect = 2e-17
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = +2
Query: 74 VRFQKFTIGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRP----EYPATLILSAD 241
+RF KFTIGHAW S++G SD + +F +L+KYSPLHN++ P E + +YP+T++L+AD
Sbjct: 598 LRFHKFTIGHAWTSEFGCSDKEEEFHWLIKYSPLHNVKRPWEQKTDLFFQYPSTMLLTAD 657
Query: 242 HDDR 253
HDDR
Sbjct: 658 HDDR 661
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 3 VAACINQRPDLYGAAVVQVGVLDM 74
V ACINQRPDL+G A+ VGV+DM
Sbjct: 574 VGACINQRPDLFGCALAHVGVMDM 597
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 346 DTKAGHGGGKPTTKIIDEHTDILCFMTQALGLKFV 450
+ KAGHG G+PT K+IDE D FM + + ++
Sbjct: 696 EVKAGHGAGRPTQKMIDEAADRYSFMAKMVDASWI 730
>At1g69020.1 68414.m07897 prolyl oligopeptidase family protein
similar to SP|Q59536 Protease II (EC 3.4.21.83)
(Oligopeptidase B) {Moraxella lacunata}; contains Pfam
profiles PF00326: prolyl oligopeptidase family, PF02897:
Prolyl oligopeptidase, N-terminal beta-propeller domain;
contains non-consensus GA donor splice site at intron 5
Length = 757
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 116 DYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATLILSADHDDR 253
++G+ DN+T F +L YSP I+ YP+ L+ ++ HD R
Sbjct: 651 EFGNPDNQTDFGSILSYSPYDKIR----KDVCYPSMLVTTSFHDSR 692
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 390 NFSGGFSAAVPRLGVEPGEQRRALRRTSAPPRAA-VRPRTSASAAHPRS 247
N SG ++A P+ P A +SAPPRA PRTS+ P +
Sbjct: 32 NLSGFSTSANPQQQASPPPPSLAGEESSAPPRARNDNPRTSSGGFDPEA 80
>At5g66960.1 68418.m08442 prolyl oligopeptidase family protein
similar to OpdB [Treponema denticola] GI:13786054;
contains Pfam profiles PF00326: prolyl oligopeptidase
family, PF02897: Prolyl oligopeptidase, N-terminal
beta-propeller domain
Length = 792
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 3 VAACINQRPDLYGAAVVQVGVLD 71
VA+ IN PDL+ AAV++V LD
Sbjct: 653 VASAINHCPDLFQAAVLKVPFLD 675
>At5g66850.1 68418.m08428 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain; identical
to cDNA MAP3K gamma protein kinase GI:2315152
Length = 716
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -1
Query: 371 PPPCPALVSNLASSGARCAGRAPRHVLQFGHELQRVQRTRGRRGPPTVSASPGIRADSRS 192
P P P + +A G R A A R + + +R+ R GPP S + G DSR
Sbjct: 103 PLPLPLPLPEVA--GIRNAANA-RGLDDRDRDPERLISDRTSSGPPLTSVNGGFARDSRK 159
Query: 191 AAE 183
A E
Sbjct: 160 ATE 162
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 339 GEQRRALRRTSAPPRAAVRPRTSASAAHPR 250
G+QR+ + + APP ++V P +S H R
Sbjct: 661 GKQRKTSKSSPAPPESSVAPVSSGRRHHSR 690
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 371 PPPCPALVSNLASSGARCAGRAPRHVLQFGHELQRVQRTRGRR 243
PPP P ++AS+ R R P V++F H L R T RR
Sbjct: 338 PPPPPPKSLSIASAKVR---RVPE-VVEFYHSLMRRDSTNSRR 376
>At1g33980.1 68414.m04213 Smg-4/UPF3 family protein contains Pfam
PF03467: Smg-4/UPF3 family; similar to hUPF3B
(GI:12232324) [Homo sapiens]
Length = 482
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +2
Query: 80 FQKFTIGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATLILSADH 244
F F GH +V++ G+ QF+ +++Y+P + PS+ + ++ D+
Sbjct: 69 FAAFFNGHVFVNEKGA-----QFKAIVEYAPSQRVPKPSDKKDPREGSISKDPDY 118
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,085,126
Number of Sequences: 28952
Number of extensions: 234871
Number of successful extensions: 629
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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