Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1272
(768 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060661-1|AAL28209.1| 481|Drosophila melanogaster GH08719p pro... 167 2e-41
AE014297-2289|AAF55375.1| 481|Drosophila melanogaster CG3590-PA... 167 2e-41
M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth f... 30 4.0
K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental ... 30 4.0
AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p pro... 30 4.0
AL035436-2|CAB37610.1| 2704|Drosophila melanogaster EG:140G11.1,... 30 4.0
AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA ... 30 4.0
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA... 30 4.0
AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB... 30 4.0
>AY060661-1|AAL28209.1| 481|Drosophila melanogaster GH08719p
protein.
Length = 481
Score = 167 bits (405), Expect = 2e-41
Identities = 98/188 (52%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Frame = +3
Query: 6 SQIGSSAMPYKRNPMRSERCAL*P--VI*LLYT*RS*YSCRPMVRTNP----RRLCQSSH 167
+QIGSSAMPYKRNPMRSERC +I L + + ++ + + RT RRL S
Sbjct: 280 TQIGSSAMPYKRNPMRSERCCALARHLITLFSSAANTHATQWLERTLDDSANRRLTLSEA 339
Query: 168 YPRRGFPY*RYSTDTIKYLPRPGGVSESDARHIAQELPFMATENIIMAMVQAGGDRQVCH 347
+ + + P + RHI+QELPFM+TENIIMAMV+AGGDRQVCH
Sbjct: 340 FLAADAALLTLLNISQGLVVYPKVIE----RHISQELPFMSTENIIMAMVKAGGDRQVCH 395
Query: 348 EKIRVLSHEAGAQVKQHGRDNDLIERVKKDGYFAPIISQLDKILDASTFIGRAPNKWTSF 527
EKIRVLS EAGAQVKQHG+DNDL+ RV+KD YF+PI+ QLD ILDA TF GRA ++ F
Sbjct: 396 EKIRVLSQEAGAQVKQHGKDNDLVVRVRKDPYFSPILEQLDTILDAKTFTGRASDQVGEF 455
Query: 528 WMKKSIPL 551
++ P+
Sbjct: 456 VKEEVEPV 463
Score = 59.7 bits (138), Expect = 4e-09
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 NAANTHAVQWLERTLDDSANRRI-XXXXXXXXXXXXXXXXNICQGLVVYPKVM 255
+AANTHA QWLERTLDDSANRR+ NI QGLVVYPKV+
Sbjct: 312 SAANTHATQWLERTLDDSANRRLTLSEAFLAADAALLTLLNISQGLVVYPKVI 364
Score = 39.5 bits (88), Expect = 0.005
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +2
Query: 503 SSEQVDEFLDEEVDPIIAKYADSLINVDKPVALNI 607
+S+QV EF+ EEV+P++A+Y+++L NV + V LNI
Sbjct: 448 ASDQVGEFVKEEVEPVLARYSEALKNV-QDVKLNI 481
>AE014297-2289|AAF55375.1| 481|Drosophila melanogaster CG3590-PA
protein.
Length = 481
Score = 167 bits (405), Expect = 2e-41
Identities = 98/188 (52%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Frame = +3
Query: 6 SQIGSSAMPYKRNPMRSERCAL*P--VI*LLYT*RS*YSCRPMVRTNP----RRLCQSSH 167
+QIGSSAMPYKRNPMRSERC +I L + + ++ + + RT RRL S
Sbjct: 280 TQIGSSAMPYKRNPMRSERCCALARHLITLFSSAANTHATQWLERTLDDSANRRLTLSEA 339
Query: 168 YPRRGFPY*RYSTDTIKYLPRPGGVSESDARHIAQELPFMATENIIMAMVQAGGDRQVCH 347
+ + + P + RHI+QELPFM+TENIIMAMV+AGGDRQVCH
Sbjct: 340 FLAADAALLTLLNISQGLVVYPKVIE----RHISQELPFMSTENIIMAMVKAGGDRQVCH 395
Query: 348 EKIRVLSHEAGAQVKQHGRDNDLIERVKKDGYFAPIISQLDKILDASTFIGRAPNKWTSF 527
EKIRVLS EAGAQVKQHG+DNDL+ RV+KD YF+PI+ QLD ILDA TF GRA ++ F
Sbjct: 396 EKIRVLSQEAGAQVKQHGKDNDLVVRVRKDPYFSPILEQLDTILDAKTFTGRASDQVGEF 455
Query: 528 WMKKSIPL 551
++ P+
Sbjct: 456 VKEEVEPV 463
Score = 59.7 bits (138), Expect = 4e-09
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 NAANTHAVQWLERTLDDSANRRI-XXXXXXXXXXXXXXXXNICQGLVVYPKVM 255
+AANTHA QWLERTLDDSANRR+ NI QGLVVYPKV+
Sbjct: 312 SAANTHATQWLERTLDDSANRRLTLSEAFLAADAALLTLLNISQGLVVYPKVI 364
Score = 39.5 bits (88), Expect = 0.005
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +2
Query: 503 SSEQVDEFLDEEVDPIIAKYADSLINVDKPVALNI 607
+S+QV EF+ EEV+P++A+Y+++L NV + V LNI
Sbjct: 448 ASDQVGEFVKEEVEPVLARYSEALKNV-QDVKLNI 481
>M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth
factor protein.
Length = 2703
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 501 RAPNKWTSFWMKKSIPL-SLNTQIPL*MLT 587
RAPN W FW+ K + SL +PL +LT
Sbjct: 11 RAPNTWICFWINKMHAVASLPASLPLLLLT 40
>K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental
protein protein.
Length = 2703
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 501 RAPNKWTSFWMKKSIPL-SLNTQIPL*MLT 587
RAPN W FW+ K + SL +PL +LT
Sbjct: 11 RAPNTWICFWINKMHAVASLPASLPLLLLT 40
>AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p
protein.
Length = 1602
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 162 SHYPRRGFPY*RYSTDTIKYLPRPGGVSESDARHIAQELP 281
+ +P + P R + D + +P PGG+S++D ++A P
Sbjct: 52 ARFPVKVAPCPRRTRDNLLKVPEPGGISQNDVANVAAAGP 91
>AL035436-2|CAB37610.1| 2704|Drosophila melanogaster
EG:140G11.1,FBgn0004647;N protein.
Length = 2704
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 501 RAPNKWTSFWMKKSIPL-SLNTQIPL*MLT 587
RAPN W FW+ K + SL +PL +LT
Sbjct: 11 RAPNTWICFWINKMHAVASLPASLPLLLLT 40
>AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA
protein.
Length = 2703
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 501 RAPNKWTSFWMKKSIPL-SLNTQIPL*MLT 587
RAPN W FW+ K + SL +PL +LT
Sbjct: 11 RAPNTWICFWINKMHAVASLPASLPLLLLT 40
>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
isoform A protein.
Length = 1877
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 162 SHYPRRGFPY*RYSTDTIKYLPRPGGVSESDARHIAQELP 281
+ +P + P R + D + +P PGG+S++D ++A P
Sbjct: 52 ARFPVKVAPCPRRTRDNLLKVPEPGGISQNDVANVAAAGP 91
>AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB,
isoform B protein.
Length = 1693
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 162 SHYPRRGFPY*RYSTDTIKYLPRPGGVSESDARHIAQELP 281
+ +P + P R + D + +P PGG+S++D ++A P
Sbjct: 52 ARFPVKVAPCPRRTRDNLLKVPEPGGISQNDVANVAAAGP 91
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,760,833
Number of Sequences: 53049
Number of extensions: 597179
Number of successful extensions: 1168
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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