Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1271
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    56   4e-10
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    43   3e-06
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.34 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 55.6 bits (128), Expect = 4e-10
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = -1

Query: 241 VRQPRLNHKPFT--VTIDIKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFV 68
           VR   L H+PFT  +T++ +S+       ++FL PK DE G P+   D  + F ELD F 
Sbjct: 472 VRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFT 531

Query: 67  QKVNPGQSQITRSST 23
             +  GQ+ ITR+S+
Sbjct: 532 VNLKQGQNTITRASS 546



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -2

Query: 477 TSARDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV 340
           T+ RDP FY+ +  I     E+K     YT+  L++ G+ +S+++V
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEV 437


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -1

Query: 241 VRQPRLNHKPFTVTIDIKSDVATN-AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQ 65
           VR   L ++ FT  I + +         ++FL P++DE G P+   +    F ELD F  
Sbjct: 472 VRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFIELDRFAV 531

Query: 64  KVNPGQSQITRSSTD 20
            +  G + ITR ST+
Sbjct: 532 SLKQGTNTITRHSTE 546



 Score = 28.7 bits (61), Expect = 0.048
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 468 RDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV 340
           RDP F++ +  I     EFK     YT   L++ G+ +++++V
Sbjct: 395 RDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIEV 437


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
 Frame = -3

Query: 473  RPGTQPSTSSIKELFNTSSNLNSTRYHTHKKLFTSLV*KFPTSKSTKWSHSLTISTSMP- 297
            +PG +PSTSS ++    S    ST  H   K  TS   +  T+ S             P 
Sbjct: 1156 KPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPH 1215

Query: 296  -STLSTSVKKNSRALSRLQGPSTTS*PQAVHCDNRY*I*C 180
             S  S  V  N   + +   P     P+   CD +Y + C
Sbjct: 1216 ESCSSFYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKVKC 1255


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 250 GYKVRQPRLNHKPFTVTI 197
           G K   P LNHKP  +TI
Sbjct: 253 GPKQELPDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 250 GYKVRQPRLNHKPFTVTI 197
           G K   P LNHKP  +TI
Sbjct: 145 GPKQELPDLNHKPLNLTI 162


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 522 FQPVQFIPSALDFYQTSARDPAFYQLYKRIVQ 427
           +QP+Q  P    FY  ++   A YQ Y   +Q
Sbjct: 200 YQPLQPFPPPYPFYPGTSAMLAAYQRYNPYLQ 231


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 400 LVLFKFDDVLNNSFIEL 450
           ++   FDD +NN+ IEL
Sbjct: 194 MITITFDDAINNNNIEL 210


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 490 KSTRNKLYWLKGLGAA 537
           KS RNK+ W+K  G A
Sbjct: 407 KSIRNKMKWIKDNGFA 422


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 6   LKNAKSVDERVI*DWP 53
           L+NAK VDE ++ + P
Sbjct: 473 LRNAKKVDEAILEERP 488


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 685 KAFDKKLICTVAKQSTLWATTG 620
           KA  KK++ TVA     WA  G
Sbjct: 387 KASFKKIVNTVATFDETWAKLG 408


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 457 LLPAL*KNCSIHHRI 413
           L+  L K+C +HHR+
Sbjct: 208 LVMPLCKSCDLHHRL 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,874
Number of Sequences: 336
Number of extensions: 2641
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)