Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1268
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.3  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.0  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   9.2  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.2  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 126 NSSRTSRRRLQATL 85
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 435 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 340
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 673 PLNGGRTESCRSRTKRNR 620
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 449 RPGTGASASRPNPTRPGPQSQ 387
           RPG+GAS+S+ +P     Q Q
Sbjct: 13  RPGSGASSSQRSPFHHHHQQQ 33


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 188 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 69
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 188 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 69
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,341
Number of Sequences: 2352
Number of extensions: 17765
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)