Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1267
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 54 6e-08
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 53 2e-07
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 41 5e-04
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 38 0.004
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 31 0.44
07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228... 31 0.59
01_06_0833 + 32296957-32297256,32299257-32299895 31 0.78
05_03_0023 + 7457836-7457976,7458313-7458480 30 1.0
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 30 1.0
08_01_0118 + 947394-947885,948709-948810,948914-949219,949557-94... 30 1.4
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 30 1.4
02_05_0810 - 31934965-31935013,31935096-31935217,31935328-319355... 30 1.4
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 29 1.8
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 29 1.8
08_02_0651 - 19714348-19714395,19715319-19715429,19715503-197155... 29 2.4
07_03_1734 + 29120474-29120705,29120839-29120949,29121854-291219... 29 2.4
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 29 2.4
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 28 4.1
06_01_1003 - 7798800-7799444 28 4.1
06_01_0991 + 7704063-7704707 28 4.1
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 28 5.5
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 28 5.5
07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721... 28 5.5
03_06_0728 + 35768830-35769324,35769404-35769462,35770440-357705... 28 5.5
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 5.5
02_05_0055 + 25453699-25453830,25454157-25454269,25454686-254549... 28 5.5
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 27 7.2
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 27 7.2
08_02_1177 + 24946763-24947275 27 7.2
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 27 7.2
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 27 7.2
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 27 7.2
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 27 7.2
01_03_0047 + 11939747-11939857,11940058-11940121,11940123-119402... 27 7.2
09_02_0560 - 10679432-10680502 27 9.6
07_03_1654 - 28416487-28416548,28416791-28416824,28418156-284182... 27 9.6
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 27 9.6
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 27 9.6
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678... 27 9.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 27 9.6
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 54.4 bits (125), Expect = 6e-08
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +2
Query: 182 ALLGCTAAGIRAYHAITIQGDASGGQIPA--NIVADTPQAAVPVVGSTITRQARRLYVGN 355
A + AAG A + + A G +P N+ PQA TR ARR+YVG
Sbjct: 183 AAIPALAAGA-APGQVPVVAPAISGMLPNMFNLTQTPPQAMT----QQATRHARRVYVGG 237
Query: 356 IPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQINLDKNFAFLEFRSL 505
+P E +FNQ M + G G+ VL IN DK FAF+E RS+
Sbjct: 238 LPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSV 288
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 323 TRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQINLDKNFAFLEFR 499
TR ARR+YVG +P E+ +FNQ M + G G+ VL IN DK FAF+E R
Sbjct: 222 TRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMR 281
Query: 500 SL 505
S+
Sbjct: 282 SV 283
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 323 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA--QAAGNPVLACQINLDKNFAFLEF 496
TR RRL++ N+P TE+ + N+ + S + Q + P L+C IN DK AF+EF
Sbjct: 470 TRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEF 529
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +2
Query: 281 DTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 427
D + ++ G ++T + +LY+ N+ +GVT+E+ E F++ HL A
Sbjct: 70 DLFEDSMVAAGLSVTESSTKLYISNLHYGVTKEDIQELFSEMGHLKHCA 118
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 31.5 bits (68), Expect = 0.44
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 275 VADTPQAAVPVVGSTITRQ---ARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNP 445
VA Q P S+ +++ AR +YVGN+ + T EE + FN G
Sbjct: 59 VAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQHFNS----CGTVNRV--T 112
Query: 446 VLACQINLDKNFAFLEF 496
+L + K FA++EF
Sbjct: 113 ILTDKFGQPKGFAYVEF 129
>07_03_1345 +
25919379-25920866,25921342-25921962,25922733-25922893,
25923284-25923422,25923509-25923592,25923944-25923982,
25924037-25924222,25924347-25924478,25924810-25925009,
25925294-25925498,25925618-25925944
Length = 1193
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 334 RLTCYSRTHHRHGSLWCVGDNIG--RNLTAACIALYCNG 224
R+T ++ ++G +W VGD IG NL A I+ Y NG
Sbjct: 190 RVTKWNNDPEQYGQMWAVGDVIGCCINLDAGEISFYRNG 228
>01_06_0833 + 32296957-32297256,32299257-32299895
Length = 312
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 329 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRS 502
Q R+++VG +P TE++ E+FN+ ++ V+ + + F F++F S
Sbjct: 122 QKRKIFVGGLPVSATEKKLKEYFNKFGEVN-----RAIVVIDLNTKMPRGFGFIQFAS 174
>05_03_0023 + 7457836-7457976,7458313-7458480
Length = 102
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 338 RLYVGNIPFGVTEEETMEFF 397
R+YVGN+P+ V E+ M++F
Sbjct: 19 RVYVGNLPYSVDEQTLMDYF 38
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 302 PVVGSTITRQARRLYVGNIPFGVTEEETMEFF 397
PV+ + A+++YVG IP+ +E++ FF
Sbjct: 163 PVLSEESEKNAKKVYVGGIPYYSSEDDIRSFF 194
Score = 27.9 bits (59), Expect = 5.5
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 338 RLYVGNIPFGVTEEETMEFFN 400
R+YVGN+ + +TE++ +FF+
Sbjct: 268 RVYVGNLAWDITEDDLKKFFS 288
>08_01_0118 +
947394-947885,948709-948810,948914-949219,949557-949616
Length = 319
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 302 PVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
P V I ++YVGNI + V +E E+F+Q
Sbjct: 226 PPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQ 259
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 332 ARRLYVGNIPFGVTEEETMEFFNQ 403
++ L+VGN+P+ V +E+ +FF +
Sbjct: 469 SKTLFVGNLPYNVEQEQVKQFFQE 492
>02_05_0810 -
31934965-31935013,31935096-31935217,31935328-31935519,
31937689-31937759,31938708-31938819,31938911-31939015
Length = 216
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 332 ARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEF 496
AR +YVGN+ + T EE Q H +L + K FA++EF
Sbjct: 89 ARSVYVGNVDYACTPEEV------QQHFQACGTVNRVTILTDKFGQPKGFAYVEF 137
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 332 ARRLYVGNIPFGVTEEETMEFF 397
AR+LYVGNIP VT +E F
Sbjct: 69 ARKLYVGNIPRTVTNDELAAMF 90
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +2
Query: 329 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSLV 508
++R ++V N+ F ++E + F+ ++ L A + N+ F F+EF S+
Sbjct: 680 ESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGFGFVEFDSVE 739
Query: 509 NDT 517
T
Sbjct: 740 TAT 742
>08_02_0651 -
19714348-19714395,19715319-19715429,19715503-19715572,
19716081-19716178,19716272-19716319,19716391-19716446,
19718191-19718314,19718417-19718506
Length = 214
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 341 LYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRS 502
LY+G+IP G EE+ FF Q + L A + K++ F+EF +
Sbjct: 56 LYIGHIPHGFYEEQMQGFFQQFGTVKRLRIARNR-----KTGKSKHYGFIEFEN 104
>07_03_1734 +
29120474-29120705,29120839-29120949,29121854-29121966,
29122119-29124128
Length = 821
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 13 LQYYIFPKIRWGKIKTADEGL 75
L Y+I+ IRWG++ +D+G+
Sbjct: 718 LDYFIYSSIRWGELTFSDQGV 738
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 233 IQGDASGGQ-IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFF 397
+ G GG+ I + +P A++ V +T RLY+ N+P +T ++ + F
Sbjct: 478 MNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 533
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 326 RQARRLYVGNIPFGVTEEETMEFFN 400
R RLYVGN+ F V+E + ++ F+
Sbjct: 866 RSESRLYVGNLDFRVSESDIIKMFS 890
>06_01_1003 - 7798800-7799444
Length = 214
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 326 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEF 496
R +R +YVGNI F TE E + + L AA +P N K +AF+E+
Sbjct: 7 RCSRVVYVGNIAFHATEAELRDACELIGPVRSLRLAALDPA----TNKRKGYAFVEY 59
>06_01_0991 + 7704063-7704707
Length = 214
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 326 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEF 496
R +R +YVGNI F TE E + + L AA +P N K +AF+E+
Sbjct: 7 RCSRVVYVGNIAFHATEAELRDACELIGPVRSLRLAALDPA----TNKRKGYAFVEY 59
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFF 397
G + AR+LYVGN+ +TE++ + F
Sbjct: 282 GGIASGGARKLYVGNLHSNITEDQLRQVF 310
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +2
Query: 263 PANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
PA + + P + ++ L++GN+ F + +++ EFF +
Sbjct: 287 PAATKSQNDEPKTPASNQSQGTESATLFMGNLSFNLNQDQVKEFFQE 333
>07_03_0507 -
18871260-18871361,18871444-18871560,18871792-18872120,
18872704-18872871,18873592-18873685,18873707-18873766,
18874702-18874762,18875258-18875319,18875729-18875856,
18876783-18876852,18877472-18877630
Length = 449
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 257 QIPANIVADTPQAAVP--VVGSTITRQARRLYVGNIP 361
QI N++ DT + P ++G TITR A LY+ P
Sbjct: 299 QIVTNVIRDTRKPLHPQYILGMTITRLAIPLYIFGCP 335
>03_06_0728 +
35768830-35769324,35769404-35769462,35770440-35770509,
35770626-35770748,35770836-35770964,35771268-35771717
Length = 441
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 335 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRS 502
R ++VGN+PF + +EE + F G +A V +L K A++ F++
Sbjct: 237 RTVFVGNLPFDIKDEEVYQKFCGSSGSEGDVEAI-RVVRDPDTSLGKGIAYVLFKT 291
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 332 ARRLYVGNIPFGVTEEETMEF 394
AR+LYVGN+ +TE++ +F
Sbjct: 286 ARKLYVGNLHSNITEDQLRQF 306
>02_05_0055 +
25453699-25453830,25454157-25454269,25454686-25454942,
25455480-25456297
Length = 439
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 284 TPQAAVPVVGSTITRQARRLYVGNIPFGVTEEE-TMEFFNQQMHLSGLA--QAAGNPVL 451
TP + +T + R+Y+ NI FG EE TM+ F SG + Q +PVL
Sbjct: 336 TPNVMICPYDFPLTEKDMRVYIPNITFGGEEEPVTMKRFGSFWFKSGRSGNQEGESPVL 394
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 317 TITRQARRLYVGNIPFGVTEEE 382
++++ RL+VGN+P G+ EEE
Sbjct: 178 SLSQAKHRLFVGNVPKGLGEEE 199
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +2
Query: 317 TITRQARRLYVGNIPFGVTEEE 382
++++ RL+VGN+P G++E+E
Sbjct: 183 SLSQAKHRLFVGNVPKGLSEDE 204
>08_02_1177 + 24946763-24947275
Length = 170
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1
Query: 205 RDSSISR-HYNTRRCKRRSDSCQ----YCRRHTTSCRAGGGFDYNTSSAKVICRQHTLWR 369
R SS++R H RR C+ YC H S R FDY +++ I R++ + R
Sbjct: 104 RSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVR 163
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 245 ASGGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A GG P A+ AA + T QA LYVG++ V + + + F+Q
Sbjct: 11 AEGGGAPPQ--ANGVVAAGSAAAAAATFQATSLYVGDLDVSVQDAQLFDVFSQ 61
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 326 RQARRLYVGNIPFGVTEEETMEFF 397
R +R +YVGN+P + E E + F
Sbjct: 4 RNSRTIYVGNLPGDIREREVEDLF 27
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 296 AVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
AVP V + LYVG++ V EE +E F +
Sbjct: 13 AVPAVAGGLNATVPALYVGDLHESVREEHLLEVFGK 48
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 338 RLYVGNIPFGVTEEETMEFFNQ 403
+LY+ N+ FGV+ E+ E F++
Sbjct: 107 KLYISNLDFGVSTEDIKELFSE 128
>01_03_0047 +
11939747-11939857,11940058-11940121,11940123-11940253,
11940325-11940432,11942735-11942783,11943188-11943279,
11944394-11944468,11944553-11944658,11944740-11944786,
11944856-11944913,11945299-11945348,11945728-11945784,
11945909-11945916,11946020-11946055,11946904-11946937,
11947030-11947092,11947223-11947237
Length = 367
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 326 RQARRLYVGNIPFGVTEEETMEFF 397
R +R +YVGN+P + E E + F
Sbjct: 160 RNSRTIYVGNLPGDIREREVEDLF 183
>09_02_0560 - 10679432-10680502
Length = 356
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 304 GGGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGP-GPGRRQPCFGLPD 462
GGG D + S+ +VIC + L+ R+ GV + S G G G R P + D
Sbjct: 120 GGGGDISLSNFRVICALYDLYWLNNRHIGVQLACVFSSGSHGGGWRLPKSAVAD 173
>07_03_1654 -
28416487-28416548,28416791-28416824,28418156-28418212,
28418401-28418450,28418968-28419025,28419136-28419182,
28419278-28419377,28419446-28419586,28419715-28419780,
28420024-28420118,28420440-28420629
Length = 299
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFF 397
G R +R +YVGN+P + E E + F
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLF 93
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 245 ASGGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A G P + A V V A+ LYVG++ VT+ + E F+Q
Sbjct: 9 AVNGGSPGAVTAAAAAGGVGVAVGLGGGGAQSLYVGDLEASVTDSQLYELFSQ 61
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 335 RRLYVGNIPFGVTEEETMEFFNQ 403
R LYV N+PF ++ EE + F +
Sbjct: 19 RVLYVRNLPFNISSEEMYDIFGK 41
>02_02_0100 -
6783821-6784339,6784815-6784984,6785062-6785164,
6785291-6785454,6786781-6786821,6786933-6787129
Length = 397
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 329 QARRLYVGNIPFGVTEEETMEFFN 400
+ R+++VG +P +TE+E E F+
Sbjct: 153 KTRKIFVGGLPSSLTEDELREHFS 176
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +2
Query: 239 GDASGGQIPANIVADTPQAAVPVVGSTI--TRQARRLYVGNIPFGVTEEETMEFFNQQMH 412
G GG A P A V + T R+Y+ N+P VT EE E F
Sbjct: 407 GGGGGGGGYTGSAAPEPAAKVKQCDANCDETCDNARIYISNLPPDVTVEELQELFGGIGQ 466
Query: 413 LSGLAQAAG 439
+ + Q G
Sbjct: 467 VGRIKQKRG 475
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,805,113
Number of Sequences: 37544
Number of extensions: 352639
Number of successful extensions: 1030
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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