Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1267
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    26   0.70 
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   2.1  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   5.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.0  
AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450 pr...    23   6.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.5  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   8.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +1

Query: 223 RHYNTRRCKRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKV---ICR-QHTLWR 369
           RHY TRRC+R      Y   H+  C +   F Y    +K+   +CR   + WR
Sbjct: 423 RHYQTRRCQRSRSI--YFDTHSLYC-SYNRFRYRRYLSKIQRNLCRWPDSFWR 472


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 337 SRLTCYSRTHHRHGSLW 287
           S  +CYS T   +GSLW
Sbjct: 320 SEASCYSLTRAAYGSLW 336


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 314 NPPPARQLVVCRRQYWQESDR 252
           NPP   Q V+CR  + QES R
Sbjct: 419 NPPEVGQKVLCRHPF-QESKR 438


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 307 GGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNA 411
           GGFD    +  ++CR+   WR + R   +F ST+A
Sbjct: 277 GGFDAIMQA--IVCREQIGWREKARRLLLF-STDA 308


>AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450
           protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -3

Query: 344 ITFALDVL*SNPPPARQLVVCRRQYWQESDRRL-----HRLVL*WRDMLESRRRYIPV 186
           +++ L  L SNP    ++V   R   +ESD +L     H+LV     M+E+ R + PV
Sbjct: 20  MSYLLYELASNPSIQDRVVKELRTVLEESDGQLTEAALHKLVYMEAAMMETLRMHTPV 77


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 183  LYWDVPPPGFEHITPLQYKAMQAAVRFLPILSP 281
            L + VPPPG E   P    + +  +  LP++ P
Sbjct: 1747 LSFKVPPPGIEFTLP----SPKIGIESLPVVDP 1775


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 225 PLQYKAMQAAVRFLPI 272
           P+Q KA+Q  V F+P+
Sbjct: 198 PIQDKALQNGVEFVPV 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,942
Number of Sequences: 2352
Number of extensions: 11851
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)