Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1267
(541 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 118 1e-26
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 118 1e-26
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 118 1e-26
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 33 0.84
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 33 0.84
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 33 0.84
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 33 0.84
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 33 0.84
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 33 0.84
M13450-1|AAA52408.1| 297|Homo sapiens ESD protein. 32 1.5
BT007059-1|AAP35708.1| 282|Homo sapiens esterase 10 protein. 32 1.5
BC001169-1|AAH01169.1| 282|Homo sapiens esterase D/formylglutat... 32 1.5
AL136958-4|CAI12228.1| 282|Homo sapiens esterase D/formylglutat... 32 1.5
AL136958-2|CAI12226.1| 253|Homo sapiens esterase D/formylglutat... 32 1.5
AL136958-1|CAI12225.1| 229|Homo sapiens esterase D/formylglutat... 32 1.5
AF112219-1|AAC99788.1| 282|Homo sapiens esterase D protein. 32 1.5
X07862-1|CAA30710.1| 102|Homo sapiens protein ( Human mRNA for ... 31 2.0
Z46940-2|CAA87066.1| 102|Homo sapiens protamine 2 protein. 31 2.6
U15422-2|AAC50487.1| 102|Homo sapiens protamine 2 protein. 31 2.6
M60332-1|AAA63250.1| 102|Homo sapiens proatamine 2 protein. 31 2.6
M60314-1|AAA36736.1| 454|Homo sapiens bone morphogenetic protei... 31 2.6
CR457001-1|CAG33282.1| 273|Homo sapiens HSU79274 protein. 31 2.6
BC066338-1|AAH66338.1| 102|Homo sapiens protamine 2 protein. 31 2.6
BC042671-1|AAH42671.1| 102|Homo sapiens protamine 2 protein. 31 2.6
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 31 2.6
BC027958-1|AAH27958.1| 454|Homo sapiens bone morphogenetic prot... 31 2.6
BC020967-1|AAH20967.1| 273|Homo sapiens chromosome 12 open read... 31 2.6
BC005303-1|AAH05303.1| 102|Homo sapiens protamine 2 protein. 31 2.6
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 31 2.6
AL137178-1|CAC12765.2| 454|Homo sapiens bone morphogenetic prot... 31 2.6
AL133386-1|CAB81657.2| 454|Homo sapiens bone morphogenetic prot... 31 2.6
AF215713-1|AAF34632.1| 102|Homo sapiens protamine 2 protein. 31 2.6
AB281137-1|BAF36638.1| 102|Homo sapiens protamine 2 protein. 31 2.6
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 31 3.4
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 31 3.4
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 31 3.4
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 30 4.5
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 30 4.5
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 30 4.5
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 30 4.5
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 30 4.5
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 30 4.5
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 30 4.5
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 30 4.5
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 30 4.5
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 30 4.5
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 30 4.5
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 30 4.5
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 30 4.5
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 6.0
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 6.0
BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain conta... 30 6.0
BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein. 30 6.0
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 30 6.0
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 30 6.0
AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain conta... 30 6.0
AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain conta... 30 6.0
AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein pr... 30 6.0
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 6.0
AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens ... 30 6.0
AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens ... 30 6.0
AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein. 30 6.0
M60315-1|AAA36737.1| 513|Homo sapiens transforming growth facto... 29 7.9
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 29 7.9
BC128031-1|AAI28032.1| 413|Homo sapiens BMP6 protein protein. 29 7.9
BC113019-1|AAI13020.1| 447|Homo sapiens BMP6 protein protein. 29 7.9
BC113018-1|AAI13019.1| 448|Homo sapiens BMP6 protein protein. 29 7.9
BC112352-1|AAI12353.1| 483|Homo sapiens BMP6 protein protein. 29 7.9
BC111763-1|AAI11764.1| 483|Homo sapiens BMP6 protein protein. 29 7.9
BC099625-1|AAH99625.1| 483|Homo sapiens BMP6 protein protein. 29 7.9
BC099624-1|AAH99624.1| 428|Homo sapiens BMP6 protein protein. 29 7.9
BC096085-1|AAH96085.1| 428|Homo sapiens BMP6 protein protein. 29 7.9
BC096084-1|AAH96084.1| 428|Homo sapiens BMP6 protein protein. 29 7.9
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 29 7.9
AY062301-1|AAL65729.1| 115|Homo sapiens immunoglobulin heavy ch... 29 7.9
AL135778-1|CAI19426.1| 513|Homo sapiens bone morphogenetic prot... 29 7.9
AL133541-1|CAI19472.1| 513|Homo sapiens bone morphogenetic prot... 29 7.9
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 29 7.9
AF052514-1|AAC33563.1| 514|Homo sapiens thymus specific serine ... 29 7.9
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 118 bits (284), Expect = 1e-26
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +2
Query: 275 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 454
+A TP VPVVGS +TRQARRLYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA
Sbjct: 130 LAVTP-TPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLA 188
Query: 455 CQINLDKNFAFLEFRSLVNDT 517
QIN DKNFAFLEFRS+ T
Sbjct: 189 VQINQDKNFAFLEFRSVDETT 209
Score = 56.8 bits (131), Expect = 5e-08
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3
Query: 186 YWDVPPPGFEHITPLQYKAMQAA 254
YWDVPPPGFEHITP+QYKAMQAA
Sbjct: 91 YWDVPPPGFEHITPMQYKAMQAA 113
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 118 bits (284), Expect = 1e-26
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +2
Query: 275 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 454
+A TP VPVVGS +TRQARRLYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA
Sbjct: 130 LAVTP-TPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLA 188
Query: 455 CQINLDKNFAFLEFRSLVNDT 517
QIN DKNFAFLEFRS+ T
Sbjct: 189 VQINQDKNFAFLEFRSVDETT 209
Score = 56.8 bits (131), Expect = 5e-08
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3
Query: 186 YWDVPPPGFEHITPLQYKAMQAA 254
YWDVPPPGFEHITP+QYKAMQAA
Sbjct: 91 YWDVPPPGFEHITPMQYKAMQAA 113
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 118 bits (284), Expect = 1e-26
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +2
Query: 275 VADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLA 454
+A TP VPVVGS +TRQARRLYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA
Sbjct: 130 LAVTP-TPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLA 188
Query: 455 CQINLDKNFAFLEFRSLVNDT 517
QIN DKNFAFLEFRS+ T
Sbjct: 189 VQINQDKNFAFLEFRSVDETT 209
Score = 56.8 bits (131), Expect = 5e-08
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3
Query: 186 YWDVPPPGFEHITPLQYKAMQAA 254
YWDVPPPGFEHITP+QYKAMQAA
Sbjct: 91 YWDVPPPGFEHITPMQYKAMQAA 113
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.84
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A + V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.84
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A + V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.84
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A + V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.84
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A + V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.84
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A + V + R R ++VGNIP+ TEE+ + F++
Sbjct: 1 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 37
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.7 bits (71), Expect = 0.84
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
A + V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>M13450-1|AAA52408.1| 297|Homo sapiens ESD protein.
Length = 297
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 155 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 196
>BT007059-1|AAP35708.1| 282|Homo sapiens esterase 10 protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 140 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
>BC001169-1|AAH01169.1| 282|Homo sapiens esterase
D/formylglutathione hydrolase protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 140 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
>AL136958-4|CAI12228.1| 282|Homo sapiens esterase
D/formylglutathione hydrolase protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 140 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
>AL136958-2|CAI12226.1| 253|Homo sapiens esterase
D/formylglutathione hydrolase protein.
Length = 253
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 111 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 152
>AL136958-1|CAI12225.1| 229|Homo sapiens esterase
D/formylglutathione hydrolase protein.
Length = 229
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 87 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 128
>AF112219-1|AAC99788.1| 282|Homo sapiens esterase D protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 340 PSRLTCYSRTHHRHGSLWCVGDNIGRNLTAACIALYCNGVIC 215
P R++ + + HG+L C N G+ + + A CN V+C
Sbjct: 140 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
>X07862-1|CAA30710.1| 102|Homo sapiens protein ( Human mRNA for
protamine 2. ).
Length = 102
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Frame = +1
Query: 160 VHVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
+HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 39 MHVEVYERTHGQSQYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>Z46940-2|CAA87066.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>U15422-2|AAC50487.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>M60332-1|AAA63250.1| 102|Homo sapiens proatamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>M60314-1|AAA36736.1| 454|Homo sapiens bone morphogenetic protein 5
protein.
Length = 454
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
KR++ + H S R DYNTS K C++H L+
Sbjct: 320 KRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELY 359
>CR457001-1|CAG33282.1| 273|Homo sapiens HSU79274 protein.
Length = 273
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 HYNTRRCKRRSDSCQY-CR--RHTTSCRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGV 393
H+ +R R S Y C RH G D +SA + QH+LWR R G+
Sbjct: 150 HHRSRLSSRYSQKQHYPCTTWRHQLEREDSGSSDIAAASAPEMLIQHSLWRPVRNKEGI 208
>BC066338-1|AAH66338.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>BC042671-1|AAH42671.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
+++ V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>BC027958-1|AAH27958.1| 454|Homo sapiens bone morphogenetic protein
5 protein.
Length = 454
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
KR++ + H S R DYNTS K C++H L+
Sbjct: 320 KRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELY 359
>BC020967-1|AAH20967.1| 273|Homo sapiens chromosome 12 open reading
frame 24 protein.
Length = 273
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 HYNTRRCKRRSDSCQY-CR--RHTTSCRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGV 393
H+ +R R S Y C RH G D +SA + QH+LWR R G+
Sbjct: 150 HHRSRLSSRYSQKQHYPCTTWRHQLEREDSGSSDIAAASAPEMLIQHSLWRPVRNKEGI 208
>BC005303-1|AAH05303.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 293 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
+++ V + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>AL137178-1|CAC12765.2| 454|Homo sapiens bone morphogenetic protein
5 protein.
Length = 454
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
KR++ + H S R DYNTS K C++H L+
Sbjct: 320 KRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELY 359
>AL133386-1|CAB81657.2| 454|Homo sapiens bone morphogenetic protein
5 protein.
Length = 454
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
KR++ + H S R DYNTS K C++H L+
Sbjct: 320 KRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELY 359
>AF215713-1|AAF34632.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>AB281137-1|BAF36638.1| 102|Homo sapiens protamine 2 protein.
Length = 102
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 163 HVDVSLRFTGM--YRRRDSSISRHYNTRR-----CKRRSD-SCQYCRRHTTSCR 300
HV+V R G YRRR S R + R C+RR SC++ RRH CR
Sbjct: 40 HVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCR 93
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 30.7 bits (66), Expect = 3.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 320 ITRQARRLYVGNIPFGVTEEETMEFFNQ 403
+ R+ R L+VGN+P V EE+ +E F +
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKR 28
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 30.7 bits (66), Expect = 3.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 320 ITRQARRLYVGNIPFGVTEEETMEFFNQ 403
+ R+ R L+VGN+P V EE+ +E F +
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKR 28
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 30.7 bits (66), Expect = 3.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 320 ITRQARRLYVGNIPFGVTEEETMEFFNQ 403
+ R+ R L+VGN+P V EE+ +E F +
Sbjct: 1 MVRETRHLWVGNLPENVREEKIIEHFKR 28
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 30.3 bits (65), Expect = 4.5
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 287 PQAAVPVVGST---ITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLAC 457
P A PV+ S + AR +YVGN+ +G T EE + H G +L
Sbjct: 153 PGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEEL------EAHFHGCGSVNRVTILCD 206
Query: 458 QIN-LDKNFAFLEF 496
+ + K FA++EF
Sbjct: 207 KFSGHPKGFAYIEF 220
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 30.3 bits (65), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 311 GSTITRQARRLYVGNIPFGVTEEETMEFFNQ 403
G Q RL+VGN+P +TEEE + F +
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 96
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 30.3 bits (65), Expect = 4.5
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 287 PQAAVPVVGST---ITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLAC 457
P A PV+ S + AR +YVGN+ +G T EE + H G +L
Sbjct: 153 PGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEEL------EAHFHGCGSVNRVTILCD 206
Query: 458 QIN-LDKNFAFLEF 496
+ + K FA++EF
Sbjct: 207 KFSGHPKGFAYIEF 220
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 391
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 391
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 686 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 741
>BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein.
Length = 272
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 191 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 246
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 391
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 391
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 798
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 717 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 772
>AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 686 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 741
>AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein
protein.
Length = 369
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 288 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 343
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETME 391
+P + D + A P V T T + LY+GN+ + T+E+ E
Sbjct: 56 LPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTE 99
>AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12466 fis, clone NT2RM1000826, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 686 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 741
>AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12454 fis, clone NT2RM1000555, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 686 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 741
>AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein.
Length = 826
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 516 VSFTNDLNSRNAKFLSKLIWQAKTGLPAAWA-RPDRCIC*LKNSIVSSSVTPKGML 352
V F+ LN R K + +W+ G A A RPDR + LKN + + P+ M+
Sbjct: 745 VEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 800
>M60315-1|AAA36737.1| 513|Homo sapiens transforming growth
factor-beta BMP protein protein.
Length = 513
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 379 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 418
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 308 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN---LDKN 478
+G I+ RL+VG+IP T+E +E F++ ++GL + + +L Q + ++
Sbjct: 214 LGVCISVANNRLFVGSIPKNKTKENILEEFSK---VTGLTEGLVDVILYHQPDDKKKNRG 270
Query: 479 FAFLEF 496
F FLE+
Sbjct: 271 FCFLEY 276
>BC128031-1|AAI28032.1| 413|Homo sapiens BMP6 protein protein.
Length = 413
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 279 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 318
>BC113019-1|AAI13020.1| 447|Homo sapiens BMP6 protein protein.
Length = 447
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 313 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 352
>BC113018-1|AAI13019.1| 448|Homo sapiens BMP6 protein protein.
Length = 448
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 314 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 353
>BC112352-1|AAI12353.1| 483|Homo sapiens BMP6 protein protein.
Length = 483
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 349 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 388
>BC111763-1|AAI11764.1| 483|Homo sapiens BMP6 protein protein.
Length = 483
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 349 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 388
>BC099625-1|AAH99625.1| 483|Homo sapiens BMP6 protein protein.
Length = 483
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 349 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 388
>BC099624-1|AAH99624.1| 428|Homo sapiens BMP6 protein protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 294 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 333
>BC096085-1|AAH96085.1| 428|Homo sapiens BMP6 protein protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 294 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 333
>BC096084-1|AAH96084.1| 428|Homo sapiens BMP6 protein protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 294 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 333
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 308 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN---LDKN 478
+G I+ RL+VG+IP T+E +E F++ ++GL + + +L Q + ++
Sbjct: 237 LGVCISVANNRLFVGSIPKNKTKENILEEFSK---VTGLTEGLVDVILYHQPDDKKKNRG 293
Query: 479 FAFLEF 496
F FLE+
Sbjct: 294 FCFLEY 299
>AY062301-1|AAL65729.1| 115|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 115
Score = 29.5 bits (63), Expect = 7.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 208 DSSISRHYNTRRCKRRSDSCQY-CRRHTTSCRAGGGFDY 321
D SIS Y + SD+ Y C RH + G GFDY
Sbjct: 64 DKSISTAYLQWSSLKASDTAMYYCARHRSGSYFGVGFDY 102
>AL135778-1|CAI19426.1| 513|Homo sapiens bone morphogenetic protein
6 protein.
Length = 513
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 379 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 418
>AL133541-1|CAI19472.1| 513|Homo sapiens bone morphogenetic protein
6 protein.
Length = 513
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 247 KRRSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLW 366
+RR S + R DYN+S K CR+H L+
Sbjct: 379 RRRQQSRNRSTQSQDVARVSSASDYNSSELKTACRKHELY 418
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 308 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN---LDKN 478
+G I+ RL+VG+IP T+E +E F++ ++GL + + +L Q + ++
Sbjct: 237 LGVCISVANNRLFVGSIPKNKTKENILEEFSK---VTGLTEGLVDVILYHQPDDKKKNRG 293
Query: 479 FAFLEF 496
F FLE+
Sbjct: 294 FCFLEY 299
>AF052514-1|AAC33563.1| 514|Homo sapiens thymus specific serine
peptidase protein.
Length = 514
Score = 29.5 bits (63), Expect = 7.9
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 239 GDASGGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLS 418
G+ S G P +++ P A P G+ + R Y +IP G E + F + ++ L+
Sbjct: 101 GEGSLG--PGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLRFLSSRLALA 158
Query: 419 GLAQA 433
+ A
Sbjct: 159 DVVSA 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,585,073
Number of Sequences: 237096
Number of extensions: 1794097
Number of successful extensions: 4285
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 4062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4284
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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