Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1266
         (721 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080...    36   0.76 
UniRef50_A5K2L6 Cluster: Arginine N-methyltransferase 5, putativ...    33   5.4  
UniRef50_A2DGF0 Cluster: PIKK family atypical protein kinase; n=...    33   5.4  
UniRef50_Q11NI9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q1WQZ9 Cluster: Sorbitol operon transcription regulator...    33   9.4  

>UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFB0800c - Plasmodium falciparum
            (isolate 3D7)
          Length = 1817

 Score = 36.3 bits (80), Expect = 0.76
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = +2

Query: 227  NVCLQKFEHNQLNYFMSLCFYGLSK*TDIDVKNSFLFKEFYYILESLQHSTFFFTYQRLK 406
            N  L   +H ++N+F+S  FY ++K    ++K+ +  + + +    +  + FF+ Y  L 
Sbjct: 1329 NNYLDNTKHFKINHFLSSLFY-INKIIPPNMKHMYHLETYLHKNHKIYKNKFFYIYNGLD 1387

Query: 407  --GKRY*ATITALYINDRQ*LYSMHKKN 484
               K Y   I  LYIN     Y+  KKN
Sbjct: 1388 LLKKSYLVHIKKLYINSYIKSYNNKKKN 1415


>UniRef50_A5K2L6 Cluster: Arginine N-methyltransferase 5, putative;
           n=1; Plasmodium vivax|Rep: Arginine N-methyltransferase
           5, putative - Plasmodium vivax
          Length = 689

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -2

Query: 585 VEIPENKINFNES-SCSRI*LVAVGLNDFNRPRNIFFLCIEYSYC 454
           V IP+N I++ E  SC++I    +G N+F     IF++   YSYC
Sbjct: 514 VSIPQNCISYMEPISCAQI-YHKIGQNNFTGYNEIFYIVNMYSYC 557


>UniRef50_A2DGF0 Cluster: PIKK family atypical protein kinase; n=1;
            Trichomonas vaginalis G3|Rep: PIKK family atypical
            protein kinase - Trichomonas vaginalis G3
          Length = 2192

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = +1

Query: 538  TTARFVKINFVFRYFNFKLVYCKVNALSLSHICLSSV-DMLCMIS*NY-FAYILFLPKI 708
            T  RF+ +N     F  +++ C ++ +   HI    + D+LC+++ +   +++LFLP++
Sbjct: 944  TRTRFIFVNSDTSQFCGQIIQCMIDVIKQDHILQDKILDILCIVASHCGMSFLLFLPRL 1002


>UniRef50_Q11NI9 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 72

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 651 IDA*KANVTKRQCVNFTVD*FKVEIPENKINFNESSCSRI 532
           ++  K NV  ++  +  V    +E+P++KINF+ S C +I
Sbjct: 3   VEVFKTNVLNKEVADKIVSDLSIEMPQSKINFDLSDCDKI 42


>UniRef50_Q1WQZ9 Cluster: Sorbitol operon transcription regulator;
           n=1; Lactobacillus salivarius subsp. salivarius
           UCC118|Rep: Sorbitol operon transcription regulator -
           Lactobacillus salivarius subsp. salivarius (strain
           UCC118)
          Length = 619

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -3

Query: 215 IEIYPICI*MSIYALRALMKTQNTKISEQKKNYDV*YYEIEI 90
           +E YP+ + ++I  +  L    N KIS+++  Y   YY++EI
Sbjct: 332 VEKYPVAVDLAIMTVNLLESKLNIKISDKELGYLALYYQMEI 373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,945,097
Number of Sequences: 1657284
Number of extensions: 10111462
Number of successful extensions: 19787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19777
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)