Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1266
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.47 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 487 YIFFVHRI*LLPIIYVQSSYCRLVT 413
           Y+FFV      PI+Y+  SYC +VT
Sbjct: 145 YVFFVENE---PILYLIFSYCPIVT 166


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 2   NIFNNTQSNCTLHKIVF*KLFSLLIIT-YDIFQFHNIRRHNFFFVQISLY 148
           +IFN    N TL+ +VF    + +IIT  DI     + +  F  + I+LY
Sbjct: 74  HIFNILMKNVTLNDVVFIFCSAPIIITILDIEILGYVNKAKFGKLLINLY 123


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 195 TDWINFNKLKTMCAYKNLSI 254
           TDW+NF ++      K LS+
Sbjct: 160 TDWVNFERIYYKLTKKKLSV 179


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 486 IFFLCIEYSYC 454
           +F LCI Y YC
Sbjct: 280 LFLLCIYYFYC 290



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 483 FFLCIEYSYCLSFMY 439
           F LCI Y YC   ++
Sbjct: 142 FLLCIYYFYCAFIIF 156


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 328 FLI*RVLLYFRITSTLNIFFYI 393
           FL+   L Y  +TS LN F++I
Sbjct: 279 FLLDEKLSYIILTSFLNNFYFI 300


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 213 NKLKTMCAYKNLSITN*IILCHCVFM 290
           NKLK M  +K+   T   I C   F+
Sbjct: 116 NKLKHMLIWKSYKRTQIFITCELFFV 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,680
Number of Sequences: 336
Number of extensions: 3300
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)