Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1248
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 52 2e-06
Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9 pro... 30 6.1
BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p... 30 6.1
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 6.1
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 6.1
AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p... 30 6.1
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 30 6.1
AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens ... 30 8.1
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 51.6 bits (118), Expect = 2e-06
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +3
Query: 438 MIGRADIEGSKSNVAMNAWLPQASIPVVTF 527
MIGRADIEGSKS+VAMNAW PQAS P F
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 503 SQYPCGNFSGTSC*K 547
+ YPCGNFS TSC K
Sbjct: 23 ASYPCGNFSDTSCLK 37
>Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1394
Score = 30.3 bits (65), Expect = 6.1
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = -2
Query: 323 DSNTAQYERNRSFGHLVHAL--GRAPVVRSYHPRDYA*TPLRPKPA*PNPARICSLWSPE 150
+ N+A + +++ H H++ A RS P T P PA PA++ ++S E
Sbjct: 124 ECNSADHIKSQDSQHTPHSMTPSNATAPRSSTPSHGQTTATEPTPAQKTPAKVVYVFSTE 183
Query: 149 ----SREAL--NNVTLLVAFRIQN 96
+ EA+ V +V+F IQN
Sbjct: 184 MANKAAEAVLKGQVETIVSFHIQN 207
>BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1426
Score = 30.3 bits (65), Expect = 6.1
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = -2
Query: 323 DSNTAQYERNRSFGHLVHAL--GRAPVVRSYHPRDYA*TPLRPKPA*PNPARICSLWSPE 150
+ N+A + +++ H H++ A RS P T P PA PA++ ++S E
Sbjct: 124 ECNSADHIKSQDSQHTPHSMTPSNATAPRSSTPSHGQTTATEPTPAQKTPAKVVYVFSTE 183
Query: 149 ----SREAL--NNVTLLVAFRIQN 96
+ EA+ V +V+F IQN
Sbjct: 184 MANKAAEAVLKGQVETIVSFHIQN 207
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 215 TPLRPKPA*PNPARICSLWSPESRE 141
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 215 TPLRPKPA*PNPARICSLWSPESRE 141
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
protein.
Length = 1426
Score = 30.3 bits (65), Expect = 6.1
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = -2
Query: 323 DSNTAQYERNRSFGHLVHAL--GRAPVVRSYHPRDYA*TPLRPKPA*PNPARICSLWSPE 150
+ N+A + +++ H H++ A RS P T P PA PA++ ++S E
Sbjct: 124 ECNSADHIKSQDSQHTPHSMTPSNATAPRSSTPSHGQTTATEPTPAQKTPAKVVYVFSTE 183
Query: 149 ----SREAL--NNVTLLVAFRIQN 96
+ EA+ V +V+F IQN
Sbjct: 184 MANKAAEAVLKGQVETIVSFHIQN 207
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting
protein protein.
Length = 1183
Score = 30.3 bits (65), Expect = 6.1
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = -1
Query: 393 RERELGLDRRETG*FYPTDGLSLR**YCSVREEPQFRTFGSCTRPSAGGAKLPSAGLCLN 214
R+R+ +D ++ YP L+LR +RE+P + +F + + GA+ GL
Sbjct: 78 RKRDAFMDHLKSK--YPQHALALRGQQDRMREQPNYWSFKTRSSRHTQGAQ---PGLADQ 132
Query: 213 ASKAEASLAESGKDMLTVEPRESGGSKQCDFTSR--VSHSKRETRRRSP 73
A+K + AES + M E G S+ F +S S +T+ RSP
Sbjct: 133 AAKLSYASAESLETMSEAE-LPLGFSRMNRFRQSLPLSRSASQTKPRSP 180
>AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens
cDNA FLJ44004 fis, clone TESTI4023546, weakly similar
to Sialidase (EC 3.2.1.18). ).
Length = 910
Score = 29.9 bits (64), Expect = 8.1
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Frame = +2
Query: 5 PDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECET-RLVKSH-CLEPPDSRGSTVSISL 178
P R R + + + P + R+S E ++ SH CLEPP +RGS +
Sbjct: 258 PKTRVPPLRPETPKNGVSPLFPEPPKTRISNLRSEPPKIGVSHLCLEPPKTRGSHLRPEP 317
Query: 179 PDSARLASALEAFRHNPADGSFAPPALGRVH---EPNVRNCGSSRTE 310
P++ E + + PP G H EP +N R E
Sbjct: 318 PETGVSHLRPEPPKTRVSSLHLEPPETGVSHLCPEPPEKNVSHLRPE 364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,073,292
Number of Sequences: 237096
Number of extensions: 2061462
Number of successful extensions: 4660
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4656
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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