Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1221
         (409 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   0.46 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   4.3  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    22   7.5  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    22   7.5  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    22   7.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   9.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   9.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   9.9  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 26.2 bits (55), Expect = 0.46
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
 Frame = +2

Query: 71  RTLDVRSGRMKL-SSYVRD----FRTPEASRFQSVNEGAL*AQMLGPERW*TM-PGQVEV 232
           RT  V +G  ++  SY +D    + T E    +SV  G     +LGP  W TM  G +++
Sbjct: 588 RTKRVPAGLQRIIHSYFQDRELVYETSEGPVVRSVTAGVPQGSILGPTLWNTMYDGVLDI 647

Query: 233 RGNPD 247
              PD
Sbjct: 648 ALPPD 652


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 174 SEHKCWDPKDGELCLVRSKSGETLMEDVAILTCKSIVGTG 293
           S+ +C+ PK  E C +    G T       L CK+    G
Sbjct: 189 SQGRCFGPKPRECCHLFCAGGCTGPTQSDCLACKNFYDDG 228


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 KARSEHKCWDPKDGELCL 218
           +A S H+CW   + EL L
Sbjct: 122 RAYSHHRCWKETEPELRL 139


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 300 PYTQFRRSICTSESLRPPSGFP 235
           P+T F RSIC  E     S  P
Sbjct: 260 PFTDFLRSICLPEQNFESSATP 281


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +3

Query: 261 ILTCKSIVGTGYRGERLIEPSSSWFRPKFPSG*LASI*NXKTVAP 395
           +L+C + +   Y   +  + S ++ +P+FP G  A++   + +AP
Sbjct: 13  VLSCLAWIHRRYHFWK--DRSVAYIKPRFPFGNFATLGKVEHIAP 55


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 125 FRTPEASRFQSVNEGAL*AQMLGPERW*TM 214
           F T +    +S+  G     +LGP  W TM
Sbjct: 678 FETSDGPVTRSITAGVPQGSILGPTLWNTM 707


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 301 PLYPVPTIDLHVRIATSSIRVSPDFDLTR 215
           P+ P+   + H   A S+ R+ P F +TR
Sbjct: 769 PVPPMGEDEAHCEPAESAKRLLPKFKITR 797


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 108 DNFILPERTSSVRLHF 61
           D F+ PER S++ L F
Sbjct: 164 DTFVTPERKSAIDLTF 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,169
Number of Sequences: 2352
Number of extensions: 7534
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)