Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1221
(409 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 33 0.49
AL357374-7|CAI13605.1| 336|Homo sapiens RNA binding motif prote... 31 2.0
CR541752-1|CAG46552.1| 331|Homo sapiens JUN protein. 30 2.6
J04111-1|AAA59197.1| 331|Homo sapiens JUN protein. 30 3.4
CR541724-1|CAG46525.1| 331|Homo sapiens JUN protein. 30 3.4
BT019759-1|AAV38564.1| 331|Homo sapiens v-jun sarcoma virus 17 ... 30 3.4
BC068522-1|AAH68522.1| 331|Homo sapiens jun oncogene protein. 30 3.4
BC006175-1|AAH06175.1| 331|Homo sapiens jun oncogene protein. 30 3.4
AY217548-1|AAO22993.1| 331|Homo sapiens v-jun sarcoma virus 17 ... 30 3.4
AL136985-1|CAC10201.1| 331|Homo sapiens jun oncogene protein. 30 3.4
DQ076156-1|AAY82463.1| 434|Homo sapiens maelstrom protein. 29 4.6
BC028595-1|AAH28595.1| 434|Homo sapiens maelstrom homolog (Dros... 29 4.6
AL158837-2|CAH69956.1| 434|Homo sapiens maelstrom homolog (Dros... 29 4.6
AL158837-1|CAH69955.1| 316|Homo sapiens maelstrom homolog (Dros... 29 4.6
AK027810-1|BAB55385.1| 434|Homo sapiens protein ( Homo sapiens ... 29 4.6
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 32.7 bits (71), Expect = 0.49
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 202 MVNYAWSGRSQGKP*WRT 255
MVNYAW+GRSQ K WR+
Sbjct: 1 MVNYAWAGRSQRKLWWRS 18
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 255 VAILTCKSIVGTGYRG 302
VA+LTCKS+V GYRG
Sbjct: 19 VAVLTCKSVVRPGYRG 34
>AL357374-7|CAI13605.1| 336|Homo sapiens RNA binding motif protein
39 protein.
Length = 336
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 321 MVRLVFRPYTQFRRSICTSESLRPPSGFPLTST*PGIVHHLSGPSICAQSAPSFTD 154
M+R +F P+ +F S C ++L +GF L P V H++ A SA SF D
Sbjct: 137 MLRGIFEPFGRFSDSECAKKALEQLNGFELAGR-PMKVGHVT-ERTDASSASSFLD 190
>CR541752-1|CAG46552.1| 331|Homo sapiens JUN protein.
Length = 331
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDMGLLKLASP 74
>J04111-1|AAA59197.1| 331|Homo sapiens JUN protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>CR541724-1|CAG46525.1| 331|Homo sapiens JUN protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>BT019759-1|AAV38564.1| 331|Homo sapiens v-jun sarcoma virus 17
oncogene homolog (avian) protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>BC068522-1|AAH68522.1| 331|Homo sapiens jun oncogene protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>BC006175-1|AAH06175.1| 331|Homo sapiens jun oncogene protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>AY217548-1|AAO22993.1| 331|Homo sapiens v-jun sarcoma virus 17
oncogene homolog (avian) protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>AL136985-1|CAC10201.1| 331|Homo sapiens jun oncogene protein.
Length = 331
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 376 FYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHVRIATSSIRVSPDFDLTRHSSP 203
F S P G + ++L S++L+ PV ++ H+R S + SPD L + +SP
Sbjct: 18 FLPSESGPYG-YSNPKILKQSMTLNLADPVGSLKPHLRAKNSDLLTSPDVGLLKLASP 74
>DQ076156-1|AAY82463.1| 434|Homo sapiens maelstrom protein.
Length = 434
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 213 CLVRSKSGETLMEDVAILTCKSIVGTGYRGERLIEPSSSWFR 338
CL + +D+ +LT + +V Y+ + L EPS +W R
Sbjct: 226 CLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWIR 267
>BC028595-1|AAH28595.1| 434|Homo sapiens maelstrom homolog
(Drosophila) protein.
Length = 434
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 213 CLVRSKSGETLMEDVAILTCKSIVGTGYRGERLIEPSSSWFR 338
CL + +D+ +LT + +V Y+ + L EPS +W R
Sbjct: 226 CLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWIR 267
>AL158837-2|CAH69956.1| 434|Homo sapiens maelstrom homolog
(Drosophila) protein.
Length = 434
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 213 CLVRSKSGETLMEDVAILTCKSIVGTGYRGERLIEPSSSWFR 338
CL + +D+ +LT + +V Y+ + L EPS +W R
Sbjct: 226 CLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWIR 267
>AL158837-1|CAH69955.1| 316|Homo sapiens maelstrom homolog
(Drosophila) protein.
Length = 316
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 213 CLVRSKSGETLMEDVAILTCKSIVGTGYRGERLIEPSSSWFR 338
CL + +D+ +LT + +V Y+ + L EPS +W R
Sbjct: 195 CLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWIR 236
>AK027810-1|BAB55385.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14904 fis, clone PLACE1005603. ).
Length = 434
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 213 CLVRSKSGETLMEDVAILTCKSIVGTGYRGERLIEPSSSWFR 338
CL + +D+ +LT + +V Y+ + L EPS +W R
Sbjct: 226 CLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWIR 267
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,077,110
Number of Sequences: 237096
Number of extensions: 1133679
Number of successful extensions: 5646
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5646
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -