Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1219
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 73 6e-13
AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens ... 33 0.60
BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marke... 33 1.0
BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marke... 33 1.0
BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosia... 33 1.0
AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein prot... 33 1.0
AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marke... 33 1.0
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 5.5
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 5.5
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 9.7
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 9.7
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 9.7
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 9.7
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 73.3 bits (172), Expect = 6e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +2
Query: 401 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC 505
MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSC 35
>AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ14384 fis, clone HEMBA1002150. ).
Length = 433
Score = 33.5 bits (73), Expect = 0.60
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 107 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLGRVHEPNVR--NSVPLVLSSI 280
P L AP+ Y + L RP S P + ++H P+ P + + +P+++++
Sbjct: 107 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIVANY 165
Query: 281 TIATTSHQ*GKTNLSHDGLSPAHVP 355
+++Q G ++SH PAH P
Sbjct: 166 PDLPSAYQPGILSVSHSAQPPAHQP 190
>BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 32.7 bits (71), Expect = 1.0
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 107 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLGRVHEPNVR--NSVPLVLSSI 280
P L AP+ Y + L RP S P + ++H P+ P + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 281 TIATTSHQ*GKTNLSHDGLSPAHVP 355
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 32.7 bits (71), Expect = 1.0
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 107 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLGRVHEPNVR--NSVPLVLSSI 280
P L AP+ Y + L RP S P + ++H P+ P + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 281 TIATTSHQ*GKTNLSHDGLSPAHVP 355
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosialin
protein.
Length = 757
Score = 32.7 bits (71), Expect = 1.0
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 107 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLGRVHEPNVR--NSVPLVLSSI 280
P L AP+ Y + L RP S P + ++H P+ P + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 281 TIATTSHQ*GKTNLSHDGLSPAHVP 355
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein
protein.
Length = 757
Score = 32.7 bits (71), Expect = 1.0
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 107 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLGRVHEPNVR--NSVPLVLSSI 280
P L AP+ Y + L RP S P + ++H P+ P + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 281 TIATTSHQ*GKTNLSHDGLSPAHVP 355
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marker 1
precursor protein.
Length = 757
Score = 32.7 bits (71), Expect = 1.0
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 107 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLGRVHEPNVR--NSVPLVLSSI 280
P L AP+ Y + L RP S P + ++H P+ P + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 281 TIATTSHQ*GKTNLSHDGLSPAHVP 355
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 178 TPLRPKPA*PNPARICSLWSPESRE 104
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 178 TPLRPKPA*PNPARICSLWSPESRE 104
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 200 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 93
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 200 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 93
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 200 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 93
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 29.5 bits (63), Expect = 9.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 200 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 93
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,588,117
Number of Sequences: 237096
Number of extensions: 1906892
Number of successful extensions: 3847
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3847
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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