Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1217
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    29   0.16 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.6  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.1  

>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 159 RTSNSAARGTACPRTTNSCSETRPS 233
           R   SA +   CPRT ++C+ET PS
Sbjct: 67  RMHASARKRAYCPRTRSACAETFPS 91


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 515 ETKVLSVDLEKAQTEKLPHLQQAYSELRS 601
           ETKVL  + EK QTE L  L++A  E +S
Sbjct: 458 ETKVLLEEKEKLQTE-LIELKRAVDESKS 485


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 261 YEDGHN*RSLTVEFLNSCLLF*DKLF 184
           Y DGH     +VEFL +C ++   +F
Sbjct: 59  YTDGHQRVRTSVEFLFNCNIYGGSMF 84


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/60 (23%), Positives = 23/60 (38%)
 Frame = +3

Query: 270  ELIKDANAPAFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDK 449
            E+I D     F  ++V  L T W    +       K     ++  +YE  + EL   L +
Sbjct: 864  EIISDFKNNVFSIQEVEQLVTLWKNRNDVQKSFREKQDQLARMREHYEQIQRELKDKLKR 923


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 401 PNFLCVFELMKTIIRCLVGCV 339
           P   C+ E +K    CL GCV
Sbjct: 39  PQKACISEAVKCQTSCLPGCV 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,753
Number of Sequences: 2352
Number of extensions: 11381
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)