Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1217
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein. 32 1.5
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 32 1.5
AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein. 32 1.5
AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein. 32 1.5
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 32 1.5
AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein. 32 1.5
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 32 1.5
AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein. 32 1.5
AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein. 32 1.5
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 32 1.5
AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein. 32 1.5
AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein. 32 1.5
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 32 1.5
AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens ... 32 1.5
AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti... 32 1.5
L23116-1|AAA16645.1| 669|Homo sapiens galctocerebrosidase protein. 31 4.5
D86181-1|BAA24902.1| 669|Homo sapiens galactocerebrosidase prot... 31 4.5
D25283-1|BAA04971.1| 669|Homo sapiens galactocerebrosidase prot... 31 4.5
>AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2837 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2890
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 4923 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 4976
>AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2511 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2564
>AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2837 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2890
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 4923 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 4976
>AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2837 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2890
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 4923 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 4976
>AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2511 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2564
>AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2837 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2890
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 4923 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 4976
>AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2511 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2564
>AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2837 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2890
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 4923 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 4976
>AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens
cDNA FLJ30627 fis, clone CTONG2001955, moderately
similar to Homo sapiens mRNA for actin binding protein
ABP620. ).
Length = 1174
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 70 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 123
>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen 1
eA protein.
Length = 5171
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 297 AFVREDVRTLETGWNTAYETSNDRLHKLKDTQKVWSNYEYQKEELLSDLDKIEN 458
A ++ + T++T W+T + +R +KLK++ + Y+ Q E L +DK +N
Sbjct: 2511 AALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKEQVETLWPWIDKCQN 2564
>L23116-1|AAA16645.1| 669|Homo sapiens galctocerebrosidase protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 436 QIWIKSRITWSTLASNSVSRISDVTPRN*SIKCRLG-ESPD 555
Q+ + ITW+ ASN++S I D N +IKC + E+PD
Sbjct: 516 QVLNQRPITWAADASNTISIIGDYNWTNLTIKCDVYIETPD 556
>D86181-1|BAA24902.1| 669|Homo sapiens galactocerebrosidase
protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 436 QIWIKSRITWSTLASNSVSRISDVTPRN*SIKCRLG-ESPD 555
Q+ + ITW+ ASN++S I D N +IKC + E+PD
Sbjct: 516 QVLNQRPITWAADASNTISIIGDYNWTNLTIKCDVYIETPD 556
>D25283-1|BAA04971.1| 669|Homo sapiens galactocerebrosidase
protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 436 QIWIKSRITWSTLASNSVSRISDVTPRN*SIKCRLG-ESPD 555
Q+ + ITW+ ASN++S I D N +IKC + E+PD
Sbjct: 516 QVLNQRPITWAADASNTISIIGDYNWTNLTIKCDVYIETPD 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,653,647
Number of Sequences: 237096
Number of extensions: 1553372
Number of successful extensions: 3511
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3510
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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