Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1217
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 24 1.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 3.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 5.7
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 5.7
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 7.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.5
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 7.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.5
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 7.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.9
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 231 TVEFLNSCLLF*DKLFHVLQSLRFG 157
T LN C + D+ H+ LR+G
Sbjct: 110 TASILNLCAISLDRYIHIKDPLRYG 134
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 433 CQIWIKSRITWSTLASNSVSRISDVTPRN*SIKCRL 540
C+ I R +W T S + S RN S KC +
Sbjct: 345 CKTRIIGRRSWVTRESQICNNSSSDKERNSSFKCSM 380
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 340 TQPTRHRMIVFISSKTHKKFGLIMNIKRKNYCQIW 444
T P RHR+ VF++ GL+M + Y ++
Sbjct: 171 THP-RHRLCVFVAGVVFIVSGLLMLVGMVMYISVF 204
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 382 KTHKKFGLIMNIKRKNYCQIWIK 450
K K +GL N++ KNY W K
Sbjct: 91 KNIKLYGLTKNLEIKNYNIDWDK 113
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 7.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 220 KLDRQRASVMSIFIEARNSSRMLTLLLSFGKMSGLLRLAGTQ 345
+LD + + ++SIF + + + + LS G+ + L L GTQ
Sbjct: 62 RLDYRISCLLSIFKQEFDETERASGDLSLGQKTIDLELIGTQ 103
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 469 TLASNSVSRISDVTPRN*SIKCR 537
TL S+ R SD+T + S +C+
Sbjct: 452 TLLDESIQRKSDITELDVSKRCK 474
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 469 TLASNSVSRISDVTPRN*SIKCR 537
TL S+ R SD+T + S +C+
Sbjct: 158 TLLDESIQRKSDITELDVSKRCK 180
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 578 QAYSELRSLTANKPKP 625
QA ++ +S ANKPKP
Sbjct: 1011 QAQAKPQSQEANKPKP 1026
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.4 bits (43), Expect = 7.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 220 KLDRQRASVMSIFIEARNSSRMLTLLLSFGKMSGLLRLAGTQ 345
+LD + + ++SIF + + + + LS G+ + L L GTQ
Sbjct: 30 RLDYRISCLLSIFKQEFDETERASGDLSLGQKTIDLELIGTQ 71
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 360 NDRLHKLKDTQKVWSNY 410
+D HK+ D VW Y
Sbjct: 941 SDNAHKVVDASDVWCYY 957
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 423 EELLSDLDKIENYVVHPGLELG 488
E +L LDK+ + PG+ +G
Sbjct: 147 EAMLYTLDKLNTQDIVPGVRIG 168
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,108
Number of Sequences: 438
Number of extensions: 3178
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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