Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1215
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   1.7  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    25   2.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   2.9  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 540 SGLHSEHILAGSARLASALEAFRHNPADGSSHHRPLGRVHEPNVRNCGS 394
           +GL+S HI    +  + + +   H+P +G  ++ P G  + P   N G+
Sbjct: 351 AGLNSSHIYTTPSSNSLSTQ-HSHSPVNGYGNNHPTGGSNLPGNNNGGA 398


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 96  THRDCESTAYRSFSIKSF*QEVPAKLPQG 182
           THRDC S +  SFS K     VPA   +G
Sbjct: 37  THRDCCSGSCLSFSYKCV--PVPASASEG 63


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 419 SCTRPSGRWCELPSAGLCL 475
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,954
Number of Sequences: 2352
Number of extensions: 10899
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)