Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1215
         (555 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    71   4e-12
AL356489-1|CAC88180.1|  130|Homo sapiens T cell receptor beta va...    33   0.67 

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -3

Query: 253 IGRADIEGSKSNVAMNAWLPQASYPCGNFAGTSC*K 146
           IGRADIEGSKS+VAMNAW PQASYPCGNF+ TSC K
Sbjct: 2   IGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>AL356489-1|CAC88180.1|  130|Homo sapiens T cell receptor beta
           variable 25/OR9-2 protein.
          Length = 130

 Score = 33.1 bits (72), Expect = 0.67
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 332 SHDGLIPAHVPF*WVNNPTLGEFCSQDRKSRHR 234
           S +G+ P H PF WVN+   G+ CS+   SR R
Sbjct: 60  SRNGITP-HPPFLWVNSTEKGDLCSESTVSRIR 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,874,483
Number of Sequences: 237096
Number of extensions: 1824852
Number of successful extensions: 3118
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3115
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)