Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1212
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kin...    27   9.7  

>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/75 (24%), Positives = 31/75 (41%)
 Frame = -1

Query: 477  NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHH 298
            N  R++      + R +       PD  G  + ++  D   LA+  E  +   A+   H 
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230

Query: 297  RPLGRVHEPNVRNCV 253
            R L + HE N+ + V
Sbjct: 1231 RDL-KKHESNLSDFV 1244


>Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


>Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


>Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


>Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/75 (24%), Positives = 31/75 (41%)
 Frame = -1

Query: 477  NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHH 298
            N  R++      + R +       PD  G  + ++  D   LA+  E  +   A+   H 
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230

Query: 297  RPLGRVHEPNVRNCV 253
            R L + HE N+ + V
Sbjct: 1231 RDL-KKHESNLSDFV 1244


>Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


>Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 284 RPSGRWCELPSAGLCLNASKAEAS 355
           RPSG WC     GL L  ++ EAS
Sbjct: 35  RPSGPWCVKLFVGLYLQGNRNEAS 58


>AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kinase
           2 protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -1

Query: 495 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 316
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 315 DGSSHHRPL 289
             S+HH P+
Sbjct: 79  SSSNHHHPV 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,217,699
Number of Sequences: 27780
Number of extensions: 269268
Number of successful extensions: 676
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)