Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1206
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    31   2.0  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    31   2.0  

>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -1

Query: 619 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVLIPIR 506
           R+ FS  +  WNY  CW   C   P+  R N+  +L  +R
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLLRELR 366


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -1

Query: 619 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVLIPIR 506
           R+ FS  +  WNY  CW   C   P+  R N+  +L  +R
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLLRELR 366


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,162,088
Number of Sequences: 53049
Number of extensions: 655121
Number of successful extensions: 1724
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)