Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1205
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    24   1.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.8  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 518 CELPSAGLC 544
           CE+PSAGLC
Sbjct: 104 CEMPSAGLC 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 518 CELPSAGLC 544
           CE+PSAGLC
Sbjct: 52  CEMPSAGLC 60


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 518 CELPSAGLC 544
           CE+PSAGLC
Sbjct: 235 CEMPSAGLC 243


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 85  ALFFDRCTAPVKLPAWQC 32
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 85  ALFFDRCTAPVKLPAWQC 32
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,325
Number of Sequences: 336
Number of extensions: 4066
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)