Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1205
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.5  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   2.6  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         24   6.1  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         24   6.1  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         24   6.1  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         24   6.1  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   6.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   6.1  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   8.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 662 SKRETRRRSPFGSRRSMLSVFFLTRASRLRSPDILSSMS 778
           ++R+T+  SP GS  + ++   L+R S   SP++ S+ S
Sbjct: 178 ARRKTKPNSPLGSLLAAVTSPVLSRISSASSPNLSSNGS 216


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = -1

Query: 777 DIELSISGLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGST 601
           D+ L+  G    D  ++   D +D   PN L++       E    K    EPP+ +  T
Sbjct: 98  DLRLAGYGSSEEDENLRAPRDFLDAGKPNDLQQEGETLNKEPVETKPQESEPPEMQEVT 156


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 SFSIKSF*QEVPEKLPQGNWL 264
           SF+ K    EV  KLP G+WL
Sbjct: 152 SFNFKYGRAEVRAKLPTGDWL 172


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 SFSIKSF*QEVPEKLPQGNWL 264
           SF+ K    EV  KLP G+WL
Sbjct: 152 SFNFKYGRAEVRAKLPTGDWL 172


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 SFSIKSF*QEVPEKLPQGNWL 264
           SF+ K    EV  KLP G+WL
Sbjct: 152 SFNFKYGRAEVRAKLPTGDWL 172


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 SFSIKSF*QEVPEKLPQGNWL 264
           SF+ K    EV  KLP G+WL
Sbjct: 152 SFNFKYGRAEVRAKLPTGDWL 172


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 SFSIKSF*QEVPEKLPQGNWL 264
           SF+ K    EV  KLP G+WL
Sbjct: 170 SFNFKYGRAEVRAKLPTGDWL 190


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 SFSIKSF*QEVPEKLPQGNWL 264
           SF+ K    EV  KLP G+WL
Sbjct: 170 SFNFKYGRAEVRAKLPTGDWL 190


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin
          protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +2

Query: 20 SGSRTLP----GGEFDWGGTSVKE 79
          +G+RT+P    GG F  GGT +K+
Sbjct: 21 TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 66  VPPQSNSPPGSVLEPD 19
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,569
Number of Sequences: 2352
Number of extensions: 17941
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)