Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1205
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 28 8.6
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 28 8.6
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 28 8.6
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 28 8.6
>Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical
protein F19C6.2b protein.
Length = 449
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 611 RESGGSKQCDFTSRVSHSKRET---RRRSPFGSRRSMLSVFFLTRASRLRSPDILS 769
RES S D +S ++K++ ++R+ FG +R + ++ T+ S PD ++
Sbjct: 295 RESDCSGNEDDSSNAKYAKKQVFKKKKRNAFGKKRELAAILDHTKPSEHSEPDYVA 350
>Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical
protein F19C6.2a protein.
Length = 495
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 611 RESGGSKQCDFTSRVSHSKRET---RRRSPFGSRRSMLSVFFLTRASRLRSPDILS 769
RES S D +S ++K++ ++R+ FG +R + ++ T+ S PD ++
Sbjct: 341 RESDCSGNEDDSSNAKYAKKQVFKKKKRNAFGKKRELAAILDHTKPSEHSEPDYVA 396
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = -1
Query: 711 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 532
ID+ R V + + R V C +P SA A+A +F +
Sbjct: 19 IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78
Query: 531 DGSSHHRPSAECMNQM 484
S+HH P N +
Sbjct: 79 SSSNHHHPVYHSQNSL 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,678,325
Number of Sequences: 27780
Number of extensions: 400623
Number of successful extensions: 1028
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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