Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1204
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RKU4 Cluster: Synthetic antigen of P.falciparum, puta...    36   1.4  
UniRef50_Q4Q5A8 Cluster: Putative uncharacterized protein; n=3; ...    34   3.1  
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;...    33   5.5  
UniRef50_Q3ZTA2 Cluster: Metal response element-binding transcri...    33   5.5  
UniRef50_A4E7F4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q7RKU4 Cluster: Synthetic antigen of P.falciparum,
           putative; n=3; Plasmodium (Vinckeia)|Rep: Synthetic
           antigen of P.falciparum, putative - Plasmodium yoelii
           yoelii
          Length = 486

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 2   SNERTERFIVFSRAYVYVRSDVDGTFVSCVRS 97
           SNE  E F +F RA+  + +DVD  F  C  S
Sbjct: 302 SNENVEDFFIFDRAFSNISNDVDSMFTECANS 333


>UniRef50_Q4Q5A8 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 726

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 381 ADASATRLLSQPCSLGLVRVCLNVCDDTVSGTRRTRLVTR--TKDLACVRVIE 533
           AD     + S PC L +  V ++VC++ V G  R R+V R  T D +  RV+E
Sbjct: 444 ADTDDILIRSNPCRLSVNGVHISVCNEDVVGDMRDRMVERWPTADGSLRRVVE 496


>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 440

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = -1

Query: 730 PGIVHHLSGPSICAQSAPSFTDWKRDASGVRKSRT 626
           PGIVHHLSGP+  A+ AP      RD   VR  RT
Sbjct: 141 PGIVHHLSGPNAYAR-APPPRRGGRDGPVVRPRRT 174


>UniRef50_Q3ZTA2 Cluster: Metal response element-binding
           transcription factor isoform H; n=3; Oncorhynchus
           mykiss|Rep: Metal response element-binding transcription
           factor isoform H - Oncorhynchus mykiss (Rainbow trout)
           (Salmo gairdneri)
          Length = 746

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 477 ECPKLYHRRRSNKHALVRDCTAATTDASHSRPH*GRKRENTTLTC 343
           ECP  +H        L +DCT   + A + R H  R R   T  C
Sbjct: 148 ECPDTHHSEVKRYQCLYKDCTRTYSTAGNLRTHQKRHRGEYTFVC 192


>UniRef50_A4E7F4 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 472

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 146 SLLVMHRDPFVVDLRRSRGRPYEFYSFRTRSDRVSFHPRIRTV 274
           +++V   DP +V+L +S GR    Y F   +D V  HP ++ +
Sbjct: 221 TVIVCGEDPHLVELAKSTGRHVLSYGFAESNDIVCMHPDVKGI 263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,550,152
Number of Sequences: 1657284
Number of extensions: 12428707
Number of successful extensions: 28608
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28569
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)