Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1204
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   3.2  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   7.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   7.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   7.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +3

Query: 582 RTLDVRSGRMKL-SSYVRD----FRTPEASRFQSVNEGAL*AQMLGPERW*TM 725
           RT  V +G  ++  SY +D    + T E    +SV  G     +LGP  W TM
Sbjct: 588 RTKRVPAGLQRIIHSYFQDRELVYETSEGPVVRSVTAGVPQGSILGPTLWNTM 640


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 360 FLVSCLSADASATRLLSQPCSLGLVRVCLNVCDDTV 467
           FL   + ADAS   +L       LV+    VC DTV
Sbjct: 63  FLAHPIDADASHCSILENEVVFELVKQDPTVCWDTV 98


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 360 FLVSCLSADASATRLLSQPCSLGLVRVCLNVCDDTV 467
           FL   + ADAS   +L       LV+    VC DTV
Sbjct: 63  FLAHPIDADASHCSILENEVVFELVKQDPTVCWDTV 98


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 524 SHTC*ILGPCYKTGPASARNCIIADVQTNT 435
           +HT  +  P   +G  S R  IIAD+ TN+
Sbjct: 113 NHTYPLTSPIVSSGIYSFRVGIIADLDTNS 142


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +2

Query: 236 SDRVSFHPRIRTVSL 280
           +++++FHPRI+T S+
Sbjct: 634 ANKITFHPRIKTRSV 648


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,748
Number of Sequences: 2352
Number of extensions: 13272
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)