Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1204
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    30   2.8  
AE014297-4816|AAF57203.2|  644|Drosophila melanogaster CG2112-PA...    29   4.9  
BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro...    29   6.5  
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro...    29   6.5  
AY052096-1|AAK93520.1|  574|Drosophila melanogaster SD04526p pro...    29   6.5  
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ...    29   6.5  
AE014296-3703|AAN12199.1|  574|Drosophila melanogaster CG32452-P...    29   6.5  
AE014296-3702|AAN12198.1|  574|Drosophila melanogaster CG32452-P...    29   6.5  
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h...    29   8.6  
BT012669-1|AAT08475.1|   46|Drosophila melanogaster LD48059p pro...    29   8.6  
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro...    29   8.6  
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro...    29   8.6  
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ...    29   8.6  

>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 185 NPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 27
           N R+  ++    ++   S+D +RSR      ER     RQ L  R+R+ ERKR
Sbjct: 536 NERQRSKERQRSKERERSKDRQRSRERRRSKERQLSKDRQGLKERQRSNERKR 588


>AE014297-4816|AAF57203.2|  644|Drosophila melanogaster CG2112-PA
           protein.
          Length = 644

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 146 SLLVMHRDPFVVDLRRSRGRPYEFYSFRTRSDRVSFHP 259
           S+   H +  V DLR  +  P     F+T  + V FHP
Sbjct: 202 SVATEHGEILVYDLRAGKSEPLAIAKFKTPFNAVEFHP 239


>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p
           protein.
          Length = 1489

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 24/71 (33%), Positives = 33/71 (46%)
 Frame = -3

Query: 239 PNVF*TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHL 60
           P +  T +   + RA VL  RRT   A   E  T +R   R+RT  T    T  T R   
Sbjct: 335 PRILRTRQNERI-RAAVL--RRTRSGATSAEDSTLTR--TRTRTTTTTTTTTTTTRRTTT 389

Query: 59  NARKRTPERKR 27
           + +KR  +R+R
Sbjct: 390 STKKRPVQRRR 400


>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p
           protein.
          Length = 1489

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 24/71 (33%), Positives = 33/71 (46%)
 Frame = -3

Query: 239 PNVF*TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHL 60
           P +  T +   + RA VL  RRT   A   E  T +R   R+RT  T    T  T R   
Sbjct: 335 PRILRTRQNERI-RAAVL--RRTRSGATSAEDSTLTR--TRTRTTTTTTTTTTTTRRTTT 389

Query: 59  NARKRTPERKR 27
           + +KR  +R+R
Sbjct: 390 STKKRPVQRRR 400


>AY052096-1|AAK93520.1|  574|Drosophila melanogaster SD04526p
           protein.
          Length = 574

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = -3

Query: 212 RTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPER 33
           R+VSR+ +  PR  GR    R +  S  + K+  + PT   R+  + R+H+ +RKR   R
Sbjct: 210 RSVSRSHI--PRCRGRR---RSQSRSPTEPKQRSSPPTHKRRSSPS-REHIRSRKRCYSR 263

Query: 32  KR 27
            R
Sbjct: 264 DR 265


>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
           protein.
          Length = 2296

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 24/71 (33%), Positives = 33/71 (46%)
 Frame = -3

Query: 239 PNVF*TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHL 60
           P +  T +   + RA VL  RRT   A   E  T +R   R+RT  T    T  T R   
Sbjct: 335 PRILRTRQNERI-RAAVL--RRTRSGATSAEDSTLTR--TRTRTTTTTTTTTTTTRRTTT 389

Query: 59  NARKRTPERKR 27
           + +KR  +R+R
Sbjct: 390 STKKRPVQRRR 400


>AE014296-3703|AAN12199.1|  574|Drosophila melanogaster CG32452-PB,
           isoform B protein.
          Length = 574

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = -3

Query: 212 RTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPER 33
           R+VSR+ +  PR  GR    R +  S  + K+  + PT   R+  + R+H+ +RKR   R
Sbjct: 210 RSVSRSHI--PRCRGRR---RSQSRSPTEPKQRSSPPTHKRRSSPS-REHIRSRKRCYSR 263

Query: 32  KR 27
            R
Sbjct: 264 DR 265


>AE014296-3702|AAN12198.1|  574|Drosophila melanogaster CG32452-PA,
           isoform A protein.
          Length = 574

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = -3

Query: 212 RTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPER 33
           R+VSR+ +  PR  GR    R +  S  + K+  + PT   R+  + R+H+ +RKR   R
Sbjct: 210 RSVSRSHI--PRCRGRR---RSQSRSPTEPKQRSSPPTHKRRSSPS-REHIRSRKRCYSR 263

Query: 32  KR 27
            R
Sbjct: 264 DR 265


>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
           chromodomain-helicase-DNA-bindingprotein protein.
          Length = 1883

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 721 VHHLSGPSICAQSAPSFTDWKRD 653
           +HHL GP +C     + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595


>BT012669-1|AAT08475.1|   46|Drosophila melanogaster LD48059p
           protein.
          Length = 46

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 688 EHKCWDPKDGELCLV 732
           EH C DPKDGEL L+
Sbjct: 9   EHICCDPKDGELYLI 23


>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
           protein.
          Length = 1645

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 721 VHHLSGPSICAQSAPSFTDWKRD 653
           +HHL GP +C     + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595


>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
           protein.
          Length = 1101

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 721 VHHLSGPSICAQSAPSFTDWKRD 653
           +HHL GP +C     + T W+R+
Sbjct: 41  IHHLYGPFLCVVPLSTMTAWQRE 63


>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
           protein.
          Length = 1883

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 721 VHHLSGPSICAQSAPSFTDWKRD 653
           +HHL GP +C     + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,029,240
Number of Sequences: 53049
Number of extensions: 584282
Number of successful extensions: 1575
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)